RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 BRIX1Q8TDN6 353 aaKnown RBP5.51□□□□□ -1.53
CHD9-212ENST00000564641 MOGAT1Q96PD6 335 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 ASPSCR1Q9BZE9 553 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 AGAP1Q9UPQ3 857 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 SLC16A3O15427 465 aaKnown RBP5.5□□□□□ -1.53
CHD9-212ENST00000564641 ATXN1LP0C7T5 689 aaKnown RBP5.5□□□□□ -1.53
CHD9-212ENST00000564641 AKAP5P24588 427 aa5.5□□□□□ -1.53
CHD9-212ENST00000564641 PPIFP30405 207 aaKnown RBP5.5□□□□□ -1.53
CHD9-212ENST00000564641 TOB1P50616 345 aaPredicted RBP5.5□□□□□ -1.53
CHD9-212ENST00000564641 EIF2B5Q13144 721 aaKnown RBP5.5□□□□□ -1.53
CHD9-212ENST00000564641 TMEM108Q6UXF1 575 aa5.5□□□□□ -1.53
CHD9-212ENST00000564641 VGLL2Q8N8G2 317 aa5.5□□□□□ -1.53
CHD9-212ENST00000564641 NUP88Q99567 741 aaPredicted RBP5.5□□□□□ -1.53
CHD9-212ENST00000564641 PNPOQ9NVS9 261 aa5.5□□□□□ -1.53
CHD9-212ENST00000564641 DKK3Q9UBP4 350 aa5.5□□□□□ -1.53
CHD9-212ENST00000564641 ARHGEF17Q96PE2 2063 aaPredicted RBP5.49□□□□□ -1.53
CHD9-212ENST00000564641 WDR91A4D1P6 747 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 M0QYG6 137 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 QSOX1O00391 747 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 CHRM3P20309 590 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 MAP2K6P52564 334 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 LOXL3P58215 753 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 SSBP2P81877 361 aaPredicted RBP5.49□□□□□ -1.53
CHD9-212ENST00000564641 SATB1Q01826 763 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 LONRF3Q496Y0 759 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 CCDC157Q569K6 752 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 VPS53Q5VIR6 699 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 ZNF425Q6IV72 752 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 FANCBQ8NB91 859 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 DDB2Q92466 427 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 MTFMTQ96DP5 389 aaKnown RBP5.49□□□□□ -1.53
CHD9-212ENST00000564641 HSPBAP1Q96EW2 488 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 ZNF778Q96MU6 729 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 SMAD5Q99717 465 aaKnown RBP5.49□□□□□ -1.53
CHD9-212ENST00000564641 NRIP3Q9NQ35 241 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 MRPS18AQ9NVS2 196 aaKnown RBP5.49□□□□□ -1.53
CHD9-212ENST00000564641 HESX1Q9UBX0 185 aa5.49□□□□□ -1.53
CHD9-212ENST00000564641 CUX2O14529 1486 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 PPM1DO15297 605 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 IL33O95760 270 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 LATS1O95835 1130 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 JUPP14923 745 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 KELP23276 732 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 PCSK6P29122 969 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 PXNP49023 591 aaPredicted RBP5.48□□□□□ -1.53
CHD9-212ENST00000564641 EEFSECP57772 596 aaKnown RBP5.48□□□□□ -1.53
CHD9-212ENST00000564641 GTF2H3Q13889 308 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 IQCB1Q15051 598 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 MTX3Q5HYI7 312 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 PPP1R3BQ86XI6 285 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 FAM46DQ8NEK8 389 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 CHMP4CQ96CF2 233 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 CDK5RAP3Q96JB5 506 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 PTDSS2Q9BVG9 487 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 TCF7L1Q9HCS4 588 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 PCDH12Q9NPG4 1184 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 SERGEFQ9UGK8 458 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 PLEKHM1Q9Y4G2 1056 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 COL4A3BPQ9Y5P4 624 aa5.48□□□□□ -1.53
CHD9-212ENST00000564641 ERCC6Q03468 1493 aa5.47□□□□□ -1.53
CHD9-212ENST00000564641 H3BUI4 141 aa5.47□□□□□ -1.53
CHD9-212ENST00000564641 PRR35P0CG20 571 aa5.47□□□□□ -1.53
CHD9-212ENST00000564641 EVA1CP58658 441 aa5.47□□□□□ -1.53
CHD9-212ENST00000564641 TUBA4AP68366 448 aa5.47□□□□□ -1.53
CHD9-212ENST00000564641 NEK8Q86SG6 692 aa5.47□□□□□ -1.53
CHD9-212ENST00000564641 RP9Q8TA86 221 aaKnown RBP5.47□□□□□ -1.53
CHD9-212ENST00000564641 SLC46A1Q96NT5 459 aa5.47□□□□□ -1.53
CHD9-212ENST00000564641 SARS2Q9NP81 518 aaKnown RBP5.47□□□□□ -1.53
CHD9-212ENST00000564641 SERHLQ9NQF3 203 aa5.47□□□□□ -1.53
CHD9-212ENST00000564641 HOMER2Q9NSB8 354 aa5.47□□□□□ -1.53
CHD9-212ENST00000564641 LUC7L2Q9Y383 392 aaKnown RBP5.47□□□□□ -1.53
CHD9-212ENST00000564641 PCDHA1Q9Y5I3 950 aa5.47□□□□□ -1.53
CHD9-212ENST00000564641 SMARCA2P51531 1590 aa5.46□□□□□ -1.53
CHD9-212ENST00000564641 PROB1E7EW31 1015 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 AHSGP02765 367 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 IL6RP08887 468 aaPredicted RBP5.46□□□□□ -1.54
CHD9-212ENST00000564641 CYP2C9P11712 490 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 ITGB6P18564 788 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 CYP2C18P33260 490 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 PTGER1P34995 402 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 NKX6-1P78426 367 aaPredicted RBP5.46□□□□□ -1.54
CHD9-212ENST00000564641 PROSER3Q2NL68 480 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 TMEM119Q4V9L6 283 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 MORN5Q5VZ52 161 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 MTHFD1LQ6UB35 978 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 ZNF782Q6ZMW2 699 aaPredicted RBP5.46□□□□□ -1.54
CHD9-212ENST00000564641 ZBTB46Q86UZ6 589 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 REPS1Q96D71 796 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 MVB12AQ96EY5 273 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 SLC35A4Q96G79 324 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 BRINP2Q9C0B6 783 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 DLL3Q9NYJ7 618 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 SH3BP4Q9P0V3 963 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 SHOC2Q9UQ13 582 aa5.46□□□□□ -1.54
CHD9-212ENST00000564641 NCAPD3P42695 1498 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 H0YIZ8 118 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 MYO1FO00160 1098 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 NPSP0C0P6 89 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 EPHB2P29323 1055 aa5.45□□□□□ -1.54
CHD9-212ENST00000564641 VIPR2P41587 438 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms