RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 CBX2Q14781 532 aaPredicted RBP17.8■□□□□ 0.44
RNF40-206ENST00000564260 NCAPHQ15003 741 aa17.8■□□□□ 0.44
RNF40-206ENST00000564260 EXOC3L4Q17RC7 722 aa17.8■□□□□ 0.44
RNF40-206ENST00000564260 ITIH5Q86UX2 942 aa17.8■□□□□ 0.44
RNF40-206ENST00000564260 PI4K2AQ9BTU6 479 aa17.8■□□□□ 0.44
RNF40-206ENST00000564260 NT5C1AQ9BXI3 368 aa17.8■□□□□ 0.44
RNF40-206ENST00000564260 ELOVL4Q9GZR5 314 aa17.8■□□□□ 0.44
RNF40-206ENST00000564260 FANCLQ9NW38 375 aa17.8■□□□□ 0.44
RNF40-206ENST00000564260 GCNT4Q9P109 453 aa17.8■□□□□ 0.44
RNF40-206ENST00000564260 POLIQ9UNA4 740 aa17.8■□□□□ 0.44
RNF40-206ENST00000564260 USTQ9Y2C2 406 aa17.8■□□□□ 0.44
RNF40-206ENST00000564260 USP15Q9Y4E8 981 aaPredicted RBP17.8■□□□□ 0.44
RNF40-206ENST00000564260 CILPO75339 1184 aa17.79■□□□□ 0.44
RNF40-206ENST00000564260 MICAL2O94851 1124 aa17.79■□□□□ 0.44
RNF40-206ENST00000564260 FGF19O95750 216 aa17.79■□□□□ 0.44
RNF40-206ENST00000564260 PTPN1P18031 435 aaKnown RBP17.79■□□□□ 0.44
RNF40-206ENST00000564260 LMO2P25791 158 aa17.79■□□□□ 0.44
RNF40-206ENST00000564260 EPHB3P54753 998 aa17.79■□□□□ 0.44
RNF40-206ENST00000564260 RPL10AP62906 217 aaKnown RBP17.79■□□□□ 0.44
RNF40-206ENST00000564260 MIIPQ5JXC2 388 aa17.79■□□□□ 0.44
RNF40-206ENST00000564260 RARS2Q5T160 578 aaKnown RBP17.79■□□□□ 0.44
RNF40-206ENST00000564260 IQCEQ6IPM2 695 aa17.79■□□□□ 0.44
RNF40-206ENST00000564260 SPOPLQ6IQ16 392 aa17.79■□□□□ 0.44
RNF40-206ENST00000564260 LRRTM3Q86VH5 581 aa17.79■□□□□ 0.44
RNF40-206ENST00000564260 CREBRFQ8IUR6 639 aa17.79■□□□□ 0.44
RNF40-206ENST00000564260 SPATA2LQ8IUW3 424 aaPredicted RBP17.79■□□□□ 0.44
RNF40-206ENST00000564260 SMG7Q92540 1137 aaKnown RBP17.79■□□□□ 0.44
RNF40-206ENST00000564260 ZNF707Q96C28 371 aaPredicted RBP17.79■□□□□ 0.44
RNF40-206ENST00000564260 WDR6Q9NNW5 1121 aaKnown RBP17.79■□□□□ 0.44
RNF40-206ENST00000564260 EHD2Q9NZN4 543 aa17.79■□□□□ 0.44
RNF40-206ENST00000564260 LIMA1Q9UHB6 759 aaKnown RBP17.79■□□□□ 0.44
RNF40-206ENST00000564260 KIAA1257Q9ULG3 409 aa17.79■□□□□ 0.44
RNF40-206ENST00000564260 YIPF1Q9Y548 306 aa17.79■□□□□ 0.44
RNF40-206ENST00000564260 ZFP37Q9Y6Q3 630 aaPredicted RBP17.79■□□□□ 0.44
RNF40-206ENST00000564260 BRWD1Q9NSI6 2320 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 RFPL2O75678 378 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 OR4Q2P0C623 313 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 HAPLN1P10915 354 aaPredicted RBP17.78■□□□□ 0.44
RNF40-206ENST00000564260 NDST1P52848 882 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 CDH8P55286 799 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 TFF2Q03403 129 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 DUSP4Q13115 394 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 VEPH1Q14D04 833 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 TRIM65Q6PJ69 517 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 TMC5Q6UXY8 1006 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 SCARA5Q6ZMJ2 495 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 AOPEPQ8N6M6 819 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 TMEM209Q96SK2 561 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 PHF7Q9BWX1 381 aaPredicted RBP17.78■□□□□ 0.44
RNF40-206ENST00000564260 INTS2Q9H0H0 1204 aaKnown RBP17.78■□□□□ 0.44
RNF40-206ENST00000564260 SDCBP2Q9H190 292 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 PIDD1Q9HB75 910 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 PRDM6Q9NQX0 595 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 CISHQ9NSE2 258 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 ZMYM5Q9UJ78 669 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 GTF3C4Q9UKN8 822 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 NR2E1Q9Y466 385 aa17.78■□□□□ 0.44
RNF40-206ENST00000564260 MTCL1Q9Y4B5 1905 aaKnown RBP17.77■□□□□ 0.44
RNF40-206ENST00000564260 MYBPHLA2RUH7 354 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 ZNF197O14709 1029 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 TRIM66O15016 1216 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 SEC24AO95486 1093 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 VNN2O95498 520 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 WEE2P0C1S8 567 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 SPATA31D3P0C874 917 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 BMP1P13497 986 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 PTPN2P17706 415 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 CDK11BP21127 795 aaKnown RBP17.77■□□□□ 0.44
RNF40-206ENST00000564260 ACAT1P24752 427 aaKnown RBP17.77■□□□□ 0.44
RNF40-206ENST00000564260 EPHA5P54756 1037 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 KRT31Q15323 416 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 FKBP15Q5T1M5 1219 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 SPATA31D4Q6ZUB0 917 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 DHX40Q8IX18 779 aaKnown RBP17.77■□□□□ 0.44
RNF40-206ENST00000564260 ATAD1Q8NBU5 361 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 FAM200AQ8TCP9 573 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 PSMG2Q969U7 264 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 PCED1BQ96HM7 432 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 SPATA17Q96L03 361 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 ZNF512Q96ME7 567 aaPredicted RBP17.77■□□□□ 0.44
RNF40-206ENST00000564260 PGLYRP2Q96PD5 576 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 CRTAC1Q9NQ79 661 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 ABI2Q9NYB9 513 aaPredicted RBP17.77■□□□□ 0.44
RNF40-206ENST00000564260 APEX2Q9UBZ4 518 aa17.77■□□□□ 0.44
RNF40-206ENST00000564260 PLXNA3P51805 1871 aa17.77■□□□□ 0.43
RNF40-206ENST00000564260 PAEPP09466 180 aa17.76■□□□□ 0.43
RNF40-206ENST00000564260 PDGFRBP09619 1106 aa17.76■□□□□ 0.43
RNF40-206ENST00000564260 MFAP3P55082 362 aa17.76■□□□□ 0.43
RNF40-206ENST00000564260 TWF1Q12792 350 aa17.76■□□□□ 0.43
RNF40-206ENST00000564260 IQCB1Q15051 598 aa17.76■□□□□ 0.43
RNF40-206ENST00000564260 MGAT5BQ3V5L5 792 aa17.76■□□□□ 0.43
RNF40-206ENST00000564260 ADHFE1Q8IWW8 467 aa17.76■□□□□ 0.43
RNF40-206ENST00000564260 PPM1KQ8N3J5 372 aa17.76■□□□□ 0.43
RNF40-206ENST00000564260 C12orf76Q8N812 135 aaPredicted RBP17.76■□□□□ 0.43
RNF40-206ENST00000564260 TATDN2Q93075 761 aa17.76■□□□□ 0.43
RNF40-206ENST00000564260 MYLPFQ96A32 169 aa17.76■□□□□ 0.43
RNF40-206ENST00000564260 TMEM176AQ96HP8 235 aa17.76■□□□□ 0.43
RNF40-206ENST00000564260 C8orf48Q96LL4 319 aa17.76■□□□□ 0.43
RNF40-206ENST00000564260 PLCB1Q9NQ66 1216 aa17.76■□□□□ 0.43
RNF40-206ENST00000564260 TMLHEQ9NVH6 421 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms