RNA–Protein interactions for RNA: ENST00000563961.5

USP7-208, Transcript of ubiquitin specific peptidase 7, humanhuman

TSL 5

Gene USP7, Length 4,533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP7-208ENST00000563961 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.95□□□□□ -0.02
USP7-208ENST00000563961 GPD1P21695 349 aa14.95□□□□□ -0.02
USP7-208ENST00000563961 CTCFP49711 727 aaPredicted RBP14.95□□□□□ -0.02
USP7-208ENST00000563961 RWDD4Q6NW29 188 aaKnown RBP14.95□□□□□ -0.02
USP7-208ENST00000563961 USP54Q70EL1 1684 aa14.95□□□□□ -0.02
USP7-208ENST00000563961 DOT1LQ8TEK3 1739 aa14.95□□□□□ -0.02
USP7-208ENST00000563961 FAM193BQ96PV7 902 aaPredicted RBP14.95□□□□□ -0.02
USP7-208ENST00000563961 ERVK-5Q9HDB9 667 aa14.95□□□□□ -0.02
USP7-208ENST00000563961 AVENQ9NQS1 362 aaPredicted RBP14.95□□□□□ -0.02
USP7-208ENST00000563961 ABCF3Q9NUQ8 709 aa14.95□□□□□ -0.02
USP7-208ENST00000563961 CCNE2O96020 404 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 SLC4A1P02730 911 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 ZSCAN5DPP0CG00 497 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 STILQ15468 1287 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 ANKRD20A8PQ5CZ79 823 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 ZC3H7BQ9UGR2 993 aaKnown RBP14.94□□□□□ -0.02
USP7-208ENST00000563961 SRGAP2BP0DMP2 458 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 CXCL8P10145 99 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 ALDH5A1P51649 535 aaPredicted RBP14.94□□□□□ -0.02
USP7-208ENST00000563961 ATXN3P54252 364 aaPredicted RBP14.94□□□□□ -0.02
USP7-208ENST00000563961 OTUD4Q01804 1114 aaKnown RBP14.94□□□□□ -0.02
USP7-208ENST00000563961 ASPHQ12797 758 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 SH2D4BQ5SQS7 431 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 C1orf146Q5VVC0 180 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 SPOCD1Q6ZMY3 1216 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 PPIL6Q8IXY8 311 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 TRAPPC12Q8WVT3 735 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 PRCCQ92733 491 aaPredicted RBP14.94□□□□□ -0.02
USP7-208ENST00000563961 SKIP12755 728 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 ALDH18A1P54886 795 aaKnown RBP14.94□□□□□ -0.02
USP7-208ENST00000563961 TMCO4Q5TGY1 634 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 CD302Q8IX05 232 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 PIP4K2CQ8TBX8 421 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 ASAP3Q8TDY4 903 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 CCT6BQ92526 530 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 SEMA4DQ92854 862 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 STAMBPL1Q96FJ0 436 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 ZNF518BQ9C0D4 1074 aa14.94□□□□□ -0.02
USP7-208ENST00000563961 MAP3K7O43318 606 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 GCLCP48506 637 aaPredicted RBP14.93□□□□□ -0.02
USP7-208ENST00000563961 SNAPC2Q13487 334 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 NUDCD3Q8IVD9 361 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 WDR75Q8IWA0 830 aaKnown RBP14.93□□□□□ -0.02
USP7-208ENST00000563961 C3orf20Q8ND61 904 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 GSDMBQ8TAX9 411 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 ZNF560Q96MR9 790 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 KREMEN1Q96MU8 473 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 P2RX7Q99572 595 aaKnown RBP14.93□□□□□ -0.02
USP7-208ENST00000563961 SCOCQ9UIL1 159 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 KLRG2A4D1S0 409 aaPredicted RBP14.93□□□□□ -0.02
USP7-208ENST00000563961 GIPC1O14908 333 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 TRAPPC3O43617 180 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 LYPLA2O95372 231 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 TGFB3P10600 412 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 NCKAP1LP55160 1127 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 LAMC2Q13753 1193 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 SIAH1Q8IUQ4 282 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 LRRC57Q8N9N7 239 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.93□□□□□ -0.025e-9■□□□□ 8.7
USP7-208ENST00000563961 FBXO41Q8TF61 875 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 AGAP3Q96P47 875 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 PCDHB18PQ96TA0 734 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 TRIM4Q9C037 500 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 PORCNQ9H237 461 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 RIPK3Q9Y572 518 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 COL18A1P39060 1754 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 LSM8O95777 96 aaKnown RBP14.93□□□□□ -0.02
USP7-208ENST00000563961 STAG3L1P0CL83 205 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 GLRA2P23416 452 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 JAM2P57087 298 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 JAG1P78504 1218 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 MCL1Q07820 350 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 ERO1BQ86YB8 467 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 RIBC1Q8N443 379 aaPredicted RBP14.93□□□□□ -0.02
USP7-208ENST00000563961 ACTL9Q8TC94 416 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 TNIP3Q96KP6 325 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 TMEM237Q96Q45 408 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 SPATS2LQ9NUQ6 558 aaKnown RBP14.93□□□□□ -0.02
USP7-208ENST00000563961 SAE1Q9UBE0 346 aaPredicted RBP14.93□□□□□ -0.02
USP7-208ENST00000563961 MYH3P11055 1940 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 MYH7P12883 1935 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 CYP1A2P05177 515 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 ZFXP17010 805 aaPredicted RBP14.93□□□□□ -0.02
USP7-208ENST00000563961 TPD52P55327 224 aaPredicted RBP14.93□□□□□ -0.02
USP7-208ENST00000563961 RRP1BQ14684 758 aaKnown RBP14.93□□□□□ -0.02
USP7-208ENST00000563961 NFIL3Q16649 462 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 GOLGA7BQ2TAP0 167 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 CAPRIN2Q6IMN6 1127 aaKnown RBP14.93□□□□□ -0.02
USP7-208ENST00000563961 MFSD7Q6UXD7 560 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 ZSWIM2Q8NEG5 633 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 VCPIP1Q96JH7 1222 aa14.93□□□□□ -0.02
USP7-208ENST00000563961 ZNF200P98182 395 aaPredicted RBP14.92□□□□□ -0.02
USP7-208ENST00000563961 TMEM132BQ14DG7 1078 aa14.92□□□□□ -0.02
USP7-208ENST00000563961 ATP13A4Q4VNC1 1196 aa14.92□□□□□ -0.02
USP7-208ENST00000563961 EFHC2Q5JST6 749 aa14.92□□□□□ -0.02
USP7-208ENST00000563961 ZPBP2Q6X784 338 aa14.92□□□□□ -0.02
USP7-208ENST00000563961 PID1Q7Z2X4 250 aa14.92□□□□□ -0.02
USP7-208ENST00000563961 BRSK2Q8IWQ3 736 aa14.92□□□□□ -0.02
USP7-208ENST00000563961 C12orf56Q8IXR9 622 aa14.92□□□□□ -0.02
USP7-208ENST00000563961 GPRC5AQ8NFJ5 357 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms