RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 PGK2P07205 417 aa21.07■□□□□ 0.96
MSLN-205ENST00000563941 RFC1P35251 1148 aaPredicted RBP21.07■□□□□ 0.96
MSLN-205ENST00000563941 RAP1GAPP47736 663 aa21.07■□□□□ 0.96
MSLN-205ENST00000563941 FASTKD3Q14CZ7 662 aaKnown RBP21.07■□□□□ 0.96
MSLN-205ENST00000563941 TMEM132AQ24JP5 1023 aa21.07■□□□□ 0.96
MSLN-205ENST00000563941 RNASEH2BQ5TBB1 312 aaKnown RBP21.07■□□□□ 0.96
MSLN-205ENST00000563941 EEF1DP3Q658K8 133 aa21.07■□□□□ 0.96
MSLN-205ENST00000563941 POLNQ7Z5Q5 900 aa21.07■□□□□ 0.96
MSLN-205ENST00000563941 MAML1Q92585 1016 aa21.07■□□□□ 0.96
MSLN-205ENST00000563941 SGSM3Q96HU1 749 aa21.07■□□□□ 0.96
MSLN-205ENST00000563941 TJP2Q9UDY2 1190 aa21.07■□□□□ 0.96
MSLN-205ENST00000563941 C3orf70A6NLC5 250 aaPredicted RBP21.06■□□□□ 0.96
MSLN-205ENST00000563941 SGK1O00141 431 aa21.06■□□□□ 0.96
MSLN-205ENST00000563941 GCAP28676 217 aa21.06■□□□□ 0.96
MSLN-205ENST00000563941 POLR2BP30876 1174 aaKnown RBP21.06■□□□□ 0.96
MSLN-205ENST00000563941 PLCB3Q01970 1234 aa21.06■□□□□ 0.96
MSLN-205ENST00000563941 HP1BP3Q5SSJ5 553 aaPredicted RBP21.06■□□□□ 0.96
MSLN-205ENST00000563941 JOSD2Q8TAC2 188 aa21.06■□□□□ 0.96
MSLN-205ENST00000563941 FGD4Q96M96 766 aa21.06■□□□□ 0.96
MSLN-205ENST00000563941 TGS1Q96RS0 853 aaKnown RBP21.06■□□□□ 0.96
MSLN-205ENST00000563941 FZD8Q9H461 694 aa21.06■□□□□ 0.96
MSLN-205ENST00000563941 PCDH9Q9HC56 1237 aa21.06■□□□□ 0.96
MSLN-205ENST00000563941 CYTH4Q9UIA0 394 aa21.06■□□□□ 0.96
MSLN-205ENST00000563941 AGTPBP1Q9UPW5 1226 aa21.06■□□□□ 0.96
MSLN-205ENST00000563941 PAPPA2Q9BXP8 1791 aa21.06■□□□□ 0.96
MSLN-205ENST00000563941 SIGLEC16A6NMB1 481 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 CNMDO75829 334 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 KRT19P08727 400 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 KRT3P12035 628 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 GTF2A1P52655 376 aaPredicted RBP21.05■□□□□ 0.96
MSLN-205ENST00000563941 SLC25A11Q02978 314 aaKnown RBP21.05■□□□□ 0.96
MSLN-205ENST00000563941 TFDP1Q14186 410 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 FAM133BQ5BKY9 247 aaKnown RBP21.05■□□□□ 0.96
MSLN-205ENST00000563941 PPP1R21Q6ZMI0 780 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 GPC2Q8N158 579 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 SLC35B2Q8TB61 432 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 MAGEB18Q96M61 343 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 MPHOSPH6Q99547 160 aaKnown RBP21.05■□□□□ 0.96
MSLN-205ENST00000563941 LHX5Q9H2C1 402 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 ZWILCHQ9H900 591 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 MED7O43513 233 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 SUN1O94901 812 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 IFNB1P01574 187 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 CXCL8P10145 99 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 ZKSCAN8Q15776 578 aaPredicted RBP21.05■□□□□ 0.96
MSLN-205ENST00000563941 CCDC142Q17RM4 750 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 SMTNL2Q2TAL5 461 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 TMEM192Q8IY95 271 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 SPATA33Q96N06 139 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 CDT1Q9H211 546 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 SHOC2Q9UQ13 582 aa21.05■□□□□ 0.96
MSLN-205ENST00000563941 LRCH4O75427 683 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 PSMC4P43686 418 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 PSMC1P62191 440 aaKnown RBP21.04■□□□□ 0.96
MSLN-205ENST00000563941 DYNLT1P63172 113 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 MKRN3Q13064 507 aaKnown RBP21.04■□□□□ 0.96
MSLN-205ENST00000563941 ZNF667Q5HYK9 610 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 SPATA21Q7Z572 469 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 TRABD2AQ86V40 505 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 PARP9Q8IXQ6 854 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 ARFGAP1Q8N6T3 406 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 ZBTB10Q96DT7 871 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 BCO2Q9BYV7 579 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 RPF1Q9H9Y2 349 aaKnown RBP21.04■□□□□ 0.96
MSLN-205ENST00000563941 POC1B-GALNT4F8VUJ3 575 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 NDC80O14777 642 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 KRT7P08729 469 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 IL1R2P27930 398 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 CLCN3P51790 818 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 NR1H3Q13133 447 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 SWT1Q5T5J6 900 aaKnown RBP21.04■□□□□ 0.96
MSLN-205ENST00000563941 SMYD5Q6GMV2 418 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 CENPUQ71F23 418 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 TDRPQ86YL5 185 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 DHX37Q8IY37 1157 aaKnown RBP21.04■□□□□ 0.96
MSLN-205ENST00000563941 ZBED8Q8IZ13 594 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 PRCCQ92733 491 aaPredicted RBP21.04■□□□□ 0.96
MSLN-205ENST00000563941 ASCC2Q9H1I8 757 aaPredicted RBP21.04■□□□□ 0.96
MSLN-205ENST00000563941 VPS37BQ9H9H4 285 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 SAE1Q9UBE0 346 aaPredicted RBP21.04■□□□□ 0.96
MSLN-205ENST00000563941 SIX4Q9UIU6 781 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 EFR3BQ9Y2G0 817 aa21.04■□□□□ 0.96
MSLN-205ENST00000563941 A0A0G2JLL6 359 aaPredicted RBP21.03■□□□□ 0.96
MSLN-205ENST00000563941 FAM47DPA6NHR8 397 aa21.03■□□□□ 0.96
MSLN-205ENST00000563941 IRF6O14896 467 aa21.03■□□□□ 0.96
MSLN-205ENST00000563941 ALOX15BO15296 676 aa21.03■□□□□ 0.96
MSLN-205ENST00000563941 IL18RAPO95256 599 aa21.03■□□□□ 0.96
MSLN-205ENST00000563941 RAD23BP54727 409 aa21.03■□□□□ 0.96
MSLN-205ENST00000563941 CDH8P55286 799 aa21.03■□□□□ 0.96
MSLN-205ENST00000563941 MBTD1Q05BQ5 628 aa21.03■□□□□ 0.96
MSLN-205ENST00000563941 ORC1Q13415 861 aa21.03■□□□□ 0.96
MSLN-205ENST00000563941 HADHQ16836 314 aaKnown RBP21.03■□□□□ 0.96
MSLN-205ENST00000563941 KCNT1Q5JUK3 1230 aa21.03■□□□□ 0.96
MSLN-205ENST00000563941 EFCAB12Q6NXP0 572 aa21.03■□□□□ 0.96
MSLN-205ENST00000563941 CAPN12Q6ZSI9 719 aa21.03■□□□□ 0.96
MSLN-205ENST00000563941 PRRT2Q7Z6L0 340 aaPredicted RBP21.03■□□□□ 0.96
MSLN-205ENST00000563941 FBXO16Q8IX29 292 aaPredicted RBP21.03■□□□□ 0.96
MSLN-205ENST00000563941 FNIP1Q8TF40 1166 aa21.03■□□□□ 0.96
MSLN-205ENST00000563941 SDCBP2Q9H190 292 aa21.03■□□□□ 0.96
MSLN-205ENST00000563941 MINDY3Q9H8M7 445 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms