RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 MAPRE1Q15691 268 aaKnown RBP10.26□□□□□ -0.77
CLN6-203ENST00000563917 DUOXA2Q1HG44 320 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 C4orf50Q6ZRC1 276 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 DPH6Q7L8W6 267 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 LRRTM3Q86VH5 581 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 ADGRF2Q8IZF7 708 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 PDCL2Q8N4E4 241 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 TOP6BLQ8N6T0 577 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 MAB21L3Q8N8X9 362 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 C1orf127Q8N9H9 656 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 LEO1Q8WVC0 666 aaPredicted RBP10.26□□□□□ -0.77
CLN6-203ENST00000563917 ZFYVE19Q96K21 471 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 FNBP1Q96RU3 617 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 CBWD1Q9BRT8 395 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 PI4K2AQ9BTU6 479 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 IKZF4Q9H2S9 585 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 PDE11AQ9HCR9 933 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 TDP1Q9NUW8 608 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 GDAP2Q9NXN4 497 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 GTSE1Q9NYZ3 720 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 EHD2Q9NZN4 543 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 MTMR6Q9Y217 621 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 USP34Q70CQ2 3546 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 COL4A3Q01955 1670 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 EP300Q09472 2414 aaPredicted RBP10.25□□□□□ -0.77
CLN6-203ENST00000563917 SCN1AP35498 2009 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 FANCMQ8IYD8 2048 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 FRMD3A2A2Y4 597 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 ARNTLO00327 626 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 NRG2O14511 850 aaPredicted RBP10.25□□□□□ -0.77
CLN6-203ENST00000563917 EIF3DO15371 548 aaKnown RBP eCLIP10.25□□□□□ -0.77
CLN6-203ENST00000563917 CUTAO60888 179 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 LILRB5O75023 590 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 PPP6R2O75170 966 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 TNNI1P19237 187 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 ANXA13P27216 316 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 SOX9P48436 509 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 CASP5P51878 434 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 NLRP12P59046 1061 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 GRSF1Q12849 480 aaKnown RBP eCLIP10.25□□□□□ -0.77
CLN6-203ENST00000563917 SIM2Q14190 667 aaPredicted RBP10.25□□□□□ -0.77
CLN6-203ENST00000563917 PON2Q15165 354 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 INTS6LQ5JSJ4 861 aaKnown RBP10.25□□□□□ -0.77
CLN6-203ENST00000563917 LAIR1Q6GTX8 287 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 CEP68Q76N32 757 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 HS2ST1Q7LGA3 356 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.25□□□□□ -0.77
CLN6-203ENST00000563917 SCN4BQ8IWT1 228 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 LINC00301Q8NCQ3 95 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 TTC16Q8NEE8 873 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 NELL1Q92832 810 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 DHX58Q96C10 678 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 RMDN1Q96DB5 314 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 RSPRY1Q96DX4 576 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 FUBP3Q96I24 572 aaKnown RBP eCLIP10.25□□□□□ -0.77
CLN6-203ENST00000563917 HPDLQ96IR7 371 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 MMS19Q96T76 1030 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 MKNK1Q9BUB5 465 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 SLC46A2Q9BY10 475 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 MTMR12Q9C0I1 747 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 MAGEF1Q9HAY2 307 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 IL21Q9HBE4 155 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 TRPC7Q9HCX4 862 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 GKN1Q9NS71 199 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 INTS13Q9NVM9 706 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 FAM13BQ9NYF5 915 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 GTF3C4Q9UKN8 822 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 CDV3Q9UKY7 258 aaKnown RBP10.25□□□□□ -0.77
CLN6-203ENST00000563917 L1RE1Q9UN81 338 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 ANK1P16157 1881 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 GVINP1Q7Z2Y8 2422 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 F5P12259 2224 aa10.25□□□□□ -0.77
CLN6-203ENST00000563917 NUP210Q8TEM1 1887 aaPredicted RBP10.24□□□□□ -0.77
CLN6-203ENST00000563917 TRAV19A0A0A6YYK7 116 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 SHISA7A6NL88 538 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 FOXD2O60548 495 aaPredicted RBP10.24□□□□□ -0.77
CLN6-203ENST00000563917 PRAMEF12O95522 483 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 YEATS4O95619 227 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 CKMP06732 381 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 USP17L7P0C7H9 530 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 ACAT1P24752 427 aaKnown RBP10.24□□□□□ -0.77
CLN6-203ENST00000563917 CYP2F1P24903 491 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 IFNAR2P48551 515 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 SNRPFP62306 86 aaKnown RBP10.24□□□□□ -0.77
CLN6-203ENST00000563917 SATB1Q01826 763 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 NR1H3Q13133 447 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 TRPC3Q13507 836 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 RUNX3Q13761 415 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 KCNB1Q14721 858 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 PDGFRLQ15198 375 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 DDR2Q16832 855 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 RSPO4Q2I0M5 234 aaPredicted RBP10.24□□□□□ -0.77
CLN6-203ENST00000563917 FAM26FQ5R3K3 315 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 HEATR6Q6AI08 1181 aaKnown RBP10.24□□□□□ -0.77
CLN6-203ENST00000563917 MON1AQ86VX9 555 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 LONP2Q86WA8 852 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 WDR49Q8IV35 697 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 HSCBQ8IWL3 235 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 CPA6Q8N4T0 437 aa10.24□□□□□ -0.77
CLN6-203ENST00000563917 CCDC26Q8TAB7 109 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms