RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 HERPUD2Q9BSE4 406 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 TAS2R1Q9NYW7 299 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 ADGRA3Q8IWK6 1321 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 IGKV6D-41A0A0C4DH26 115 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 INHBAP08476 426 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 NSFP46459 744 aaKnown RBP13.36□□□□□ -0.27
CCDC187-201ENST00000563590 AP1B1Q10567 949 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 STRIP1Q5VSL9 837 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 RIPOR1Q6ZS17 1223 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 SDCCAG8Q86SQ7 713 aaPredicted RBP13.36□□□□□ -0.27
CCDC187-201ENST00000563590 KBTBD2Q8IY47 623 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 EBF3Q9H4W6 596 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 ATXN10Q9UBB4 475 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 APPL1Q9UKG1 709 aa13.36□□□□□ -0.27
CCDC187-201ENST00000563590 EIF3DO15371 548 aaKnown RBP eCLIP13.35□□□□□ -0.27
CCDC187-201ENST00000563590 SLC26A4O43511 780 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 TOM1L1O75674 476 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 ASMTLO95671 621 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 TFDP1Q14186 410 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 RASA3Q14644 834 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 SLC45A4Q5BKX6 768 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 C3orf62Q6ZUJ4 267 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 C12orf50Q8NA57 414 aaPredicted RBP13.35□□□□□ -0.27
CCDC187-201ENST00000563590 BBOF1Q8ND07 529 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 C10orf82Q8WW14 230 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 SPATA16Q9BXB7 569 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 MAK16Q9BXY0 300 aaKnown RBP13.35□□□□□ -0.27
CCDC187-201ENST00000563590 OSBPL8Q9BZF1 889 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 FHDC1Q9C0D6 1143 aaPredicted RBP13.35□□□□□ -0.27
CCDC187-201ENST00000563590 ASB3Q9Y575 518 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 ARFGEF1Q9Y6D6 1849 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 KRT1P04264 644 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 ANPEPP15144 967 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 VAMP7P51809 220 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 CYTH1Q15438 398 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 CC2D2BQ6DHV5 1058 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 APOBEC3HQ6NTF7 200 aaKnown RBP13.35□□□□□ -0.27
CCDC187-201ENST00000563590 GCNAQ96QF7 691 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 LXNQ9BS40 222 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 IFT122Q9HBG6 1241 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 GABPAQ06546 454 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 ATP13A4Q4VNC1 1196 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 MARK2Q7KZI7 788 aaKnown RBP13.35□□□□□ -0.27
CCDC187-201ENST00000563590 ZFAND2BQ8WV99 257 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 NMUR2Q9GZQ4 415 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 PSMC3IPQ9P2W1 217 aaPredicted RBP13.35□□□□□ -0.27
CCDC187-201ENST00000563590 LGALS13Q9UHV8 139 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 VAV3Q9UKW4 847 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 GRID1Q9ULK0 1009 aa13.35□□□□□ -0.27
CCDC187-201ENST00000563590 ABLIM1O14639 778 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 POTEJP0CG39 1038 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 NCF2P19878 526 aaPredicted RBP13.34□□□□□ -0.27
CCDC187-201ENST00000563590 MAN1A1P33908 653 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 PPP3CAQ08209 521 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 KCTD21Q4G0X4 260 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 DCUN1D2Q6PH85 259 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 GSTCDQ8NEC7 633 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 EPS8L1Q8TE68 723 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 PSPC1Q8WXF1 523 aaKnown RBP13.34□□□□□ -0.27
CCDC187-201ENST00000563590 POMGNT1Q8WZA1 660 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 CFAP36Q96G28 342 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 ECSITQ9BQ95 431 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 DCLK3Q9C098 648 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 RANBP17Q9H2T7 1088 aaKnown RBP13.34□□□□□ -0.27
CCDC187-201ENST00000563590 TOPORSQ9NS56 1045 aaPredicted RBP13.34□□□□□ -0.27
CCDC187-201ENST00000563590 RAB20Q9NX57 234 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 TDRKHQ9Y2W6 561 aaKnown RBP13.34□□□□□ -0.27
CCDC187-201ENST00000563590 FSCN2O14926 492 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 VAV1P15498 845 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 ARL4CP56559 192 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 CAV1Q03135 178 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 MOGSQ13724 837 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 ZNF720Q7Z2F6 126 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 APLFQ8IW19 511 aaPredicted RBP13.34□□□□□ -0.27
CCDC187-201ENST00000563590 GALNT4Q8N4A0 578 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 ZSWIM2Q8NEG5 633 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 AGR3Q8TD06 166 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 PTPRN2Q92932 1015 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 CBWD1Q9BRT8 395 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 GRIP2Q9C0E4 1043 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 DMAC2Q9NW81 257 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 PLIN4Q96Q06 1357 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 IPO5O00410 1097 aaKnown RBP13.34□□□□□ -0.27
CCDC187-201ENST00000563590 STAMBPO95630 424 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 SPATA31D3P0C874 917 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 PHBP35232 272 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 MFAP3P55082 362 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 WDR72Q3MJ13 1102 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 PLEKHG4Q58EX7 1191 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 SPATA31D4Q6ZUB0 917 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 C1orf186Q6ZWK4 172 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 CNBD2Q96M20 576 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 FIZ1Q96SL8 496 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 TMEM121Q9BTD3 319 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 WDR11Q9BZH6 1224 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 FAM192AQ9GZU8 254 aa13.34□□□□□ -0.27
CCDC187-201ENST00000563590 SAE1Q9UBE0 346 aaPredicted RBP13.34□□□□□ -0.27
CCDC187-201ENST00000563590 PIK3R2O00459 728 aa13.33□□□□□ -0.28
CCDC187-201ENST00000563590 HNRNPDLO14979 420 aaKnown RBP13.33□□□□□ -0.28
CCDC187-201ENST00000563590 ZNF189O75820 626 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms