RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 FAM49BQ9NUQ9 324 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 RNF14Q9UBS8 474 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 MYO1FO00160 1098 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 PITPNM1O00562 1244 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 EOMESO95936 686 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 WARSP23381 471 aaKnown RBP19.11■□□□□ 0.65
COMMD4-208ENST00000563220 RPL7AP62424 266 aaKnown RBP19.11■□□□□ 0.65
COMMD4-208ENST00000563220 DCAF12L1Q5VU92 463 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 WSCD1Q658N2 575 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 CTU1Q7Z7A3 348 aaKnown RBP19.11■□□□□ 0.65
COMMD4-208ENST00000563220 SPATA4Q8NEY3 305 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 FEZF2Q8TBJ5 459 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 RPGRIP1Q96KN7 1286 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 SCINQ9Y6U3 715 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 INPPL1O15357 1258 aa19.1■□□□□ 0.65
COMMD4-208ENST00000563220 CEP104O60308 925 aa19.1■□□□□ 0.65
COMMD4-208ENST00000563220 MARCKSL1P49006 195 aa19.1■□□□□ 0.65
COMMD4-208ENST00000563220 C2orf54Q08AI8 447 aa19.1■□□□□ 0.65
COMMD4-208ENST00000563220 GRIK3Q13003 919 aa19.1■□□□□ 0.65
COMMD4-208ENST00000563220 STILQ15468 1287 aa19.1■□□□□ 0.65
COMMD4-208ENST00000563220 GOLGA7BQ2TAP0 167 aa19.1■□□□□ 0.65
COMMD4-208ENST00000563220 PKDCCQ504Y2 493 aa19.1■□□□□ 0.65
COMMD4-208ENST00000563220 PLEKHG4Q58EX7 1191 aa19.1■□□□□ 0.65
COMMD4-208ENST00000563220 ANKRD33Q7Z3H0 272 aa19.1■□□□□ 0.65
COMMD4-208ENST00000563220 TTC30AQ86WT1 665 aa19.1■□□□□ 0.65
COMMD4-208ENST00000563220 FTHL17Q9BXU8 183 aa19.1■□□□□ 0.65
COMMD4-208ENST00000563220 TMEM191CA6NGB0 347 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 ENPP3O14638 875 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 ERBB2P04626 1255 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 FAM163BP0C2L3 166 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 PEX5P50542 639 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 PDCLQ13371 301 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 TCTN1Q2MV58 587 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 CLLU1OSQ5K130 101 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 PPP1R15BQ5SWA1 713 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 ARHGAP17Q68EM7 881 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 CD300LGQ6UXG3 332 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 DIS3LQ8TF46 1054 aaKnown RBP19.09■□□□□ 0.65
COMMD4-208ENST00000563220 C18orf8Q96DM3 657 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 SELENOOQ9BVL4 669 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 WNT8AQ9H1J5 351 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.09■□□□□ 0.65
COMMD4-208ENST00000563220 MIF4GDA9UHW6 222 aaKnown RBP19.09■□□□□ 0.65
COMMD4-208ENST00000563220 GABRDO14764 452 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 SPOPO43791 374 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 HSPA8P11142 646 aaKnown RBP19.09■□□□□ 0.65
COMMD4-208ENST00000563220 AARSP49588 968 aaKnown RBP eCLIP19.09■□□□□ 0.65
COMMD4-208ENST00000563220 ITIH3Q06033 890 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 FAAP100Q0VG06 881 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 TUSC3Q13454 348 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 DNAJC24Q6P3W2 148 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 FBXO46Q6PJ61 603 aaPredicted RBP19.09■□□□□ 0.65
COMMD4-208ENST00000563220 RASGEF1CQ8N431 466 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 C3orf20Q8ND61 904 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 ACTRT1Q8TDG2 376 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 SCLYQ96I15 445 aa19.09■□□□□ 0.65
COMMD4-208ENST00000563220 TULP2O00295 520 aa19.08■□□□□ 0.65
COMMD4-208ENST00000563220 PROSCO94903 275 aa19.08■□□□□ 0.65
COMMD4-208ENST00000563220 GABRB2P47870 512 aa19.08■□□□□ 0.65
COMMD4-208ENST00000563220 PSMC1P62191 440 aaKnown RBP19.08■□□□□ 0.65
COMMD4-208ENST00000563220 TUBB4BP68371 445 aa19.08■□□□□ 0.65
COMMD4-208ENST00000563220 TLE2Q04725 743 aa19.08■□□□□ 0.65
COMMD4-208ENST00000563220 TRIM60Q495X7 471 aa19.08■□□□□ 0.65
COMMD4-208ENST00000563220 TIGD5Q53EQ6 642 aa19.08■□□□□ 0.65
COMMD4-208ENST00000563220 DSTYKQ6XUX3 929 aa19.08■□□□□ 0.65
COMMD4-208ENST00000563220 XYLT1Q86Y38 959 aa19.08■□□□□ 0.65
COMMD4-208ENST00000563220 GPR161Q8N6U8 529 aaKnown RBP19.08■□□□□ 0.65
COMMD4-208ENST00000563220 DDX27Q96GQ7 796 aaKnown RBP19.08■□□□□ 0.65
COMMD4-208ENST00000563220 ANKZF1Q9H8Y5 726 aa19.08■□□□□ 0.65
COMMD4-208ENST00000563220 STRIP2Q9ULQ0 834 aa19.08■□□□□ 0.65
COMMD4-208ENST00000563220 TIMM13Q9Y5L4 95 aaPredicted RBP19.08■□□□□ 0.65
COMMD4-208ENST00000563220 B4GALT3O60512 393 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 ATP2C2O75185 946 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 B3GAT3O94766 335 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 COL6A1P12109 1028 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 CCDC130P13994 396 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 CTNNA2P26232 953 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 CTNNA1P35221 906 aaKnown RBP19.07■□□□□ 0.64
COMMD4-208ENST00000563220 CCL23P55773 120 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 ZNF211Q13398 564 aaPredicted RBP19.07■□□□□ 0.64
COMMD4-208ENST00000563220 ZNF268Q14587 947 aaPredicted RBP19.07■□□□□ 0.64
COMMD4-208ENST00000563220 PAN2Q504Q3 1202 aaKnown RBP19.07■□□□□ 0.64
COMMD4-208ENST00000563220 KIAA0319Q5VV43 1072 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 DAB2IPQ5VWQ8 1189 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 GLB1LQ6UWU2 654 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 MCEEQ96PE7 176 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 CARD9Q9H257 536 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 HIPK3Q9H422 1215 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 RBM12Q9NTZ6 932 aaKnown RBP19.07■□□□□ 0.64
COMMD4-208ENST00000563220 PCDHA3Q9Y5H8 950 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 GOLGA8SH3BPF8 625 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 RHOXF2BP0C7M4 288 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 ACAT1P24752 427 aaKnown RBP19.07■□□□□ 0.64
COMMD4-208ENST00000563220 SLC1A1P43005 524 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 GSCP56915 257 aaPredicted RBP19.07■□□□□ 0.64
COMMD4-208ENST00000563220 OGDHQ02218 1023 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 CCDC142Q17RM4 750 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 PMF1Q6P1K2 205 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 ZNF280BQ86YH2 543 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 MMGT1Q8N4V1 131 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms