RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 DLEC1Q9Y238 1755 aa5.74□□□□□ -1.49
SMG1-206ENST00000562668 BRCA1P38398 1863 aaKnown RBP5.74□□□□□ -1.49
SMG1-206ENST00000562668 POLR2AP24928 1970 aaKnown RBP5.74□□□□□ -1.49
SMG1-206ENST00000562668 COL11A2P13942 1736 aaPredicted RBP5.74□□□□□ -1.49
SMG1-206ENST00000562668 DDX60Q8IY21 1712 aaKnown RBP5.74□□□□□ -1.49
SMG1-206ENST00000562668 MAP3K15Q6ZN16 1313 aa5.74□□□□□ -1.49
SMG1-206ENST00000562668 LAMB2P55268 1798 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 ADCY9O60503 1353 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 GOLGA8AA7E2F4 631 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 ERVV-1B6SEH8 477 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 POLRMTO00411 1230 aaKnown RBP5.73□□□□□ -1.49
SMG1-206ENST00000562668 WNT10BO00744 389 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 TCERG1O14776 1098 aaKnown RBP5.73□□□□□ -1.49
SMG1-206ENST00000562668 EGR2P11161 476 aaPredicted RBP5.73□□□□□ -1.49
SMG1-206ENST00000562668 MYL6BP14649 208 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 RFC4P35249 363 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 SREBF1P36956 1147 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 FOXI1Q12951 378 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 CCDC142Q17RM4 750 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 ANO4Q32M45 955 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 MUM1L1Q5H9M0 696 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 AFMIDQ63HM1 303 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 TBC1D9BQ66K14 1250 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 COPS6Q7L5N1 327 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 MAPKAPK5Q8IW41 473 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 CMIPQ8IY22 773 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 ZNF34Q8IZ26 560 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 PQLC1Q8N2U9 271 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 AFAP1L2Q8N4X5 818 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 CHAC2Q8WUX2 184 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 REXO4Q9GZR2 422 aaKnown RBP5.73□□□□□ -1.49
SMG1-206ENST00000562668 PRDM13Q9H4Q3 707 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 DMRT3Q9NQL9 472 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 RNF181Q9P0P0 153 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 C10orf71Q711Q0 1435 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 UBN2Q6ZU65 1347 aa5.73□□□□□ -1.49
SMG1-206ENST00000562668 PXDNLA1KZ92 1463 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 CARMIL3Q8ND23 1372 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 FOSP01100 380 aaPredicted RBP5.72□□□□□ -1.49
SMG1-206ENST00000562668 RAP2AP10114 183 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 ITGAMP11215 1152 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 GUCY1A2P33402 732 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 SCAPQ12770 1279 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 TOR2AQ5JU69 321 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 CCDC30Q5VVM6 783 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 CLEC4GQ6UXB4 293 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 MED25Q71SY5 747 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 SSH1Q8WYL5 1049 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 ISCA1Q9BUE6 129 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 MRI1Q9BV20 369 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 HYPKQ9NX55 129 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 MOCS1Q9NZB8 636 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 COL4A1P02462 1669 aa5.72□□□□□ -1.49
SMG1-206ENST00000562668 IBTKQ9P2D0 1353 aaPredicted RBP5.71□□□□□ -1.5
SMG1-206ENST00000562668 ESRRBO95718 433 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 ELANEP08246 267 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 MMP10P09238 476 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 CT47B1P0C2W7 299 aaPredicted RBP5.71□□□□□ -1.5
SMG1-206ENST00000562668 ATP5JP18859 108 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 FDXRP22570 491 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 ALDH1A3P47895 512 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 RARSP54136 660 aaKnown RBP5.71□□□□□ -1.5
SMG1-206ENST00000562668 PER3P56645 1201 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 SCAND1P57086 179 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 MRPS21P82921 87 aaKnown RBP5.71□□□□□ -1.5
SMG1-206ENST00000562668 TMPRSS15P98073 1019 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 SRSF2Q01130 221 aaKnown RBP5.71□□□□□ -1.5
SMG1-206ENST00000562668 OCA2Q04671 838 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 PPP3CAQ08209 521 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 MALLQ13021 153 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 MPP3Q13368 585 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 STAT4Q14765 748 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 ERCC6LQ2NKX8 1250 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 ALDH1L2Q3SY69 923 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 SPDYE7PQ495Y7 208 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 PRR16Q569H4 304 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 CT47A1Q5JQC4 288 aaPredicted RBP5.71□□□□□ -1.5
SMG1-206ENST00000562668 SYCE2Q6PIF2 218 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 SLC44A3Q8N4M1 653 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 PLBD2Q8NHP8 589 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 NTN5Q8WTR8 489 aaPredicted RBP5.71□□□□□ -1.5
SMG1-206ENST00000562668 ZSWIM1Q9BR11 485 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 ADI1Q9BV57 179 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 SENP6Q9GZR1 1112 aaPredicted RBP5.71□□□□□ -1.5
SMG1-206ENST00000562668 R3HDMLQ9H3Y0 253 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 RNPEPQ9H4A4 650 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 VTA1Q9NP79 307 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 ZBTB21Q9ULJ3 1066 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 NOX1Q9Y5S8 564 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 RIC1Q4ADV7 1423 aa5.71□□□□□ -1.5
SMG1-206ENST00000562668 A0A1B0GTW7 788 aa5.7□□□□□ -1.5
SMG1-206ENST00000562668 ENDOD1O94919 500 aa5.7□□□□□ -1.5
SMG1-206ENST00000562668 NTSR2O95665 410 aa5.7□□□□□ -1.5
SMG1-206ENST00000562668 IGKV5-2P06315 115 aa5.7□□□□□ -1.5
SMG1-206ENST00000562668 CXCR5P32302 372 aa5.7□□□□□ -1.5
SMG1-206ENST00000562668 MCAMP43121 646 aa5.7□□□□□ -1.5
SMG1-206ENST00000562668 AIMP1Q12904 312 aaKnown RBP5.7□□□□□ -1.5
SMG1-206ENST00000562668 SUSD4Q5VX71 490 aa5.7□□□□□ -1.5
SMG1-206ENST00000562668 TSHZ3Q63HK5 1081 aa5.7□□□□□ -1.5
SMG1-206ENST00000562668 B3GNTL1Q67FW5 361 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms