RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 PALB2Q86YC2 1186 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 CCDC82Q8N4S0 544 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 EXD3Q8N9H8 876 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 DAGLBQ8NCG7 672 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 FGF11Q92914 225 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 MCRS1Q96EZ8 462 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 MISP3Q96FF7 219 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 TMEM176AQ96HP8 235 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 MBOAT7Q96N66 472 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 MAF1Q9H063 256 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 CSRNP2Q9H175 543 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 C8orf33Q9H7E9 229 aaPredicted RBP6.73□□□□□ -1.33
TCF4-213ENST00000562543 ARMT1Q9H993 441 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 CHST12Q9NRB3 414 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 POLR3BQ9NW08 1133 aaPredicted RBP6.73□□□□□ -1.33
TCF4-213ENST00000562543 PNMA2Q9UL42 364 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 SSX2IPQ9Y2D8 614 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 TELO2Q9Y4R8 837 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 PLXND1Q9Y4D7 1925 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 APCP25054 2843 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 CABIN1Q9Y6J0 2220 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 TCRBV5S4A2TA0A5A2 114 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 GPR182O15218 404 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 ICMTO60725 284 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 C8BP07358 591 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 POU2F2P09086 479 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 ATXN1LP0C7T5 689 aaKnown RBP6.72□□□□□ -1.33
TCF4-213ENST00000562543 PSMC3P17980 439 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 ITIH2P19823 946 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 HOXA9P31269 272 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 HOXD12P35452 270 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 DPP6P42658 865 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 SERPINB4P48594 390 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 RTP5Q14D33 572 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 WDR43Q15061 677 aaKnown RBP eCLIP6.72□□□□□ -1.33
TCF4-213ENST00000562543 FBLN7Q53RD9 439 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 ARHGEF16Q5VV41 709 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 TTBK2Q6IQ55 1244 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 METTL7BQ6UX53 244 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 ERICH1Q86X53 443 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 RNF168Q8IYW5 571 aaPredicted RBP6.72□□□□□ -1.33
TCF4-213ENST00000562543 RSPH1Q8WYR4 309 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 TBC1D5Q92609 795 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 DUSP23Q9BVJ7 150 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 KRTAP4-2Q9BYR5 136 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 PXMP2Q9NR77 195 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 DNAJB4Q9UDY4 337 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 FBXW11Q9UKB1 542 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 VAV3Q9UKW4 847 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 MTMR7Q9Y216 660 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 INVSQ9Y283 1065 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 ATRQ13535 2644 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 NCANO14594 1321 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 ATXN2Q99700 1313 aaKnown RBP6.72□□□□□ -1.33
TCF4-213ENST00000562543 ZNF532Q9HCE3 1301 aa6.72□□□□□ -1.33
TCF4-213ENST00000562543 MYO16Q9Y6X6 1858 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 TMEM238LA0A1B0GVL6 79 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 SLC38A8A6NNN8 435 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 SPECC1L-ADORA2AF8WAN1 911 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 CPNE3O75131 537 aaKnown RBP6.71□□□□□ -1.34
TCF4-213ENST00000562543 ATG13O75143 517 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 GADD45BO75293 160 aaPredicted RBP6.71□□□□□ -1.34
TCF4-213ENST00000562543 EFEMP2O95967 443 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 CFIP05156 583 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 SERPINF2P08697 491 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 SLFN14P0C7P3 912 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 UBTFL1P0CB47 393 aaPredicted RBP6.71□□□□□ -1.34
TCF4-213ENST00000562543 ITGB6P18564 788 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 SLC16A2P36021 539 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 PTGER3P43115 390 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 OXCT1P55809 520 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 IGBP1P78318 339 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 GFPT1Q06210 699 aaPredicted RBP6.71□□□□□ -1.34
TCF4-213ENST00000562543 EXOSC9Q06265 439 aaKnown RBP6.71□□□□□ -1.34
TCF4-213ENST00000562543 PON2Q15165 354 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 SLC5A9Q2M3M2 681 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 PABPC1LQ4VXU2 614 aaKnown RBP6.71□□□□□ -1.34
TCF4-213ENST00000562543 TNNI3KQ59H18 835 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 KIAA1614Q5VZ46 1190 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 RALGPS2Q86X27 583 aaPredicted RBP6.71□□□□□ -1.34
TCF4-213ENST00000562543 KSR1Q8IVT5 923 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 NME8Q8N427 588 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 RNF169Q8NCN4 708 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 DEPDC1BQ8WUY9 529 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 CCDC74AQ96AQ1 378 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 LGMNQ99538 433 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 APOL6Q9BWW8 343 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 ATXN3LQ9H3M9 355 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 ZFP14Q9HCL3 533 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 TBC1D13Q9NVG8 400 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 HCFC1R1Q9NWW0 138 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 ARPP21Q9UBL0 812 aaPredicted RBP6.71□□□□□ -1.34
TCF4-213ENST00000562543 PILRBQ9UKJ0 227 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 PCDHA2Q9Y5H9 948 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 AK5Q9Y6K8 562 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 FPGT-TNNI3KV9GXZ4 949 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 CEP192Q8TEP8 1941 aa6.71□□□□□ -1.34
TCF4-213ENST00000562543 MYLKQ15746 1914 aa6.7□□□□□ -1.34
TCF4-213ENST00000562543 SMIM35A0A1B0GVV1 85 aa6.7□□□□□ -1.34
TCF4-213ENST00000562543 RRN3P2A6NIE6 340 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms