RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 CD58P19256 250 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 KCNA5P22460 613 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 HOXA9P31269 272 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 UBXN1Q04323 297 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 KCNMA1Q12791 1236 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 DUSP4Q13115 394 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 PUS10Q3MIT2 529 aaKnown RBP17.44■□□□□ 0.38
USB1-206ENST00000562534 CES5AQ6NT32 575 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 RRAGAQ7L523 313 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 APTXQ7Z2E3 356 aaKnown RBP17.44■□□□□ 0.38
USB1-206ENST00000562534 SPATA2LQ8IUW3 424 aaPredicted RBP17.44■□□□□ 0.38
USB1-206ENST00000562534 ATAD1Q8NBU5 361 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 B3GALNT2Q8NCR0 500 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 CMASQ8NFW8 434 aaPredicted RBP17.44■□□□□ 0.38
USB1-206ENST00000562534 FUBP3Q96I24 572 aaKnown RBP eCLIP17.44■□□□□ 0.38
USB1-206ENST00000562534 PGLYRP2Q96PD5 576 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 PKMYT1Q99640 499 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 ABCB6Q9NP58 842 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 APEX2Q9UBZ4 518 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 CD207Q9UJ71 328 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 CDH23Q9H251 3354 aa17.44■□□□□ 0.38
USB1-206ENST00000562534 ATG2AQ2TAZ0 1938 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 LGALS16A8MUM7 142 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 HCRTO43612 131 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 TBX10O75333 385 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 PAPLNO95428 1278 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 SEC24AO95486 1093 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 ALDH1A3P47895 512 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 LEXMQ3ZCV2 418 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 CFAP221Q4G0U5 840 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 SYCE2Q6PIF2 218 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 ACOT1Q86TX2 421 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 SLC7A14Q8TBB6 771 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 WHAMMQ8TF30 809 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 TMEM176AQ96HP8 235 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 RHOBTB2Q9BYZ6 727 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 PRKD2Q9BZL6 878 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 S1PR5Q9H228 398 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 ADAM7Q9H2U9 754 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 CRTAC1Q9NQ79 661 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 TMLHEQ9NVH6 421 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 KIAA1257Q9ULG3 409 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 SLC27A5Q9Y2P5 690 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 NME7Q9Y5B8 376 aa17.43■□□□□ 0.38
USB1-206ENST00000562534 XYLBO75191 536 aa17.42■□□□□ 0.38
USB1-206ENST00000562534 LRG1P02750 347 aa17.42■□□□□ 0.38
USB1-206ENST00000562534 PSMC1P62191 440 aaKnown RBP17.42■□□□□ 0.38
USB1-206ENST00000562534 CYP27A1Q02318 531 aa17.42■□□□□ 0.38
USB1-206ENST00000562534 PLD1Q13393 1074 aa17.42■□□□□ 0.38
USB1-206ENST00000562534 ATAT1Q5SQI0 421 aa17.42■□□□□ 0.38
USB1-206ENST00000562534 ARHGEF19Q8IW93 802 aa17.42■□□□□ 0.38
USB1-206ENST00000562534 C12orf76Q8N812 135 aaPredicted RBP17.42■□□□□ 0.38
USB1-206ENST00000562534 HEXIM2Q96MH2 286 aaKnown RBP17.42■□□□□ 0.38
USB1-206ENST00000562534 ARID3AQ99856 593 aa17.42■□□□□ 0.38
USB1-206ENST00000562534 DPEP3Q9H4B8 488 aa17.42■□□□□ 0.38
USB1-206ENST00000562534 PLCB1Q9NQ66 1216 aa17.42■□□□□ 0.38
USB1-206ENST00000562534 RTN4Q9NQC3 1192 aaKnown RBP17.42■□□□□ 0.38
USB1-206ENST00000562534 ABI2Q9NYB9 513 aaPredicted RBP17.42■□□□□ 0.38
USB1-206ENST00000562534 FAM50BQ9Y247 325 aa17.42■□□□□ 0.38
USB1-206ENST00000562534 PCDHB4Q9Y5E5 795 aa17.42■□□□□ 0.38
USB1-206ENST00000562534 H3BQ06 376 aaPredicted RBP17.41■□□□□ 0.38
USB1-206ENST00000562534 VNN2O95498 520 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 POU2F2P09086 479 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 HAPLN1P10915 354 aaPredicted RBP17.41■□□□□ 0.38
USB1-206ENST00000562534 RFX1P22670 979 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 EPHB3P54753 998 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 RPL10AP62906 217 aaKnown RBP17.41■□□□□ 0.38
USB1-206ENST00000562534 FANCCQ00597 558 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 MGAT5BQ3V5L5 792 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 ZNF394Q53GI3 561 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 MDH1BQ5I0G3 518 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 RARS2Q5T160 578 aaKnown RBP17.41■□□□□ 0.38
USB1-206ENST00000562534 KLHDC7AQ5VTJ3 777 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 VSTM1Q6UX27 236 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 TMC5Q6UXY8 1006 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 GPR149Q86SP6 731 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 ELMOD1Q8N336 334 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 SMRP1Q8NCR6 262 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 ATXN2LQ8WWM7 1075 aaKnown RBP17.41■□□□□ 0.38
USB1-206ENST00000562534 PCED1BQ96HM7 432 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 ZNF512Q96ME7 567 aaPredicted RBP17.41■□□□□ 0.38
USB1-206ENST00000562534 RIPOR3Q96MK2 946 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 ERGIC2Q96RQ1 377 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 PIDD1Q9HB75 910 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 SIX2Q9NPC8 291 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 THEGQ9P2T0 379 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 DNAJC12Q9UKB3 198 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 DAAM1Q9Y4D1 1078 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 ASB3Q9Y575 518 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 INSL5Q9Y5Q6 135 aa17.41■□□□□ 0.38
USB1-206ENST00000562534 RFPL2O75678 378 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 PAEPP09466 180 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 ACO1P21399 889 aaKnown RBP17.4■□□□□ 0.38
USB1-206ENST00000562534 CYP2F1P24903 491 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 MTHFRP42898 656 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 MAGEA11P43364 429 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 RAD23BP54727 409 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 UBASH3AP57075 661 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 NR1I3Q14994 352 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 TMEM270Q6UE05 265 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms