RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 HAPLN1P10915 354 aaPredicted RBP17.85■□□□□ 0.45
CLK3-207ENST00000562389 PSMC1P62191 440 aaKnown RBP17.85■□□□□ 0.45
CLK3-207ENST00000562389 INCA1Q0VD86 236 aa17.85■□□□□ 0.45
CLK3-207ENST00000562389 C11orf57Q6ZUT1 292 aaPredicted RBP17.85■□□□□ 0.45
CLK3-207ENST00000562389 GRASPQ7Z6J2 395 aaPredicted RBP17.85■□□□□ 0.45
CLK3-207ENST00000562389 ELMOD1Q8N336 334 aa17.85■□□□□ 0.45
CLK3-207ENST00000562389 ENOX1Q8TC92 643 aaKnown RBP17.85■□□□□ 0.45
CLK3-207ENST00000562389 FUBP3Q96I24 572 aaKnown RBP eCLIP17.85■□□□□ 0.45
CLK3-207ENST00000562389 COL25A1Q9BXS0 654 aaPredicted RBP17.85■□□□□ 0.45
CLK3-207ENST00000562389 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.85■□□□□ 0.452e-7■■■■■ 93.2
CLK3-207ENST00000562389 DNMT3BQ9UBC3 853 aaKnown RBP17.85■□□□□ 0.45
CLK3-207ENST00000562389 USTQ9Y2C2 406 aa17.85■□□□□ 0.45
CLK3-207ENST00000562389 SLC27A5Q9Y2P5 690 aa17.85■□□□□ 0.45
CLK3-207ENST00000562389 ATP2C2O75185 946 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 ALDH1A3P47895 512 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 TYRO3Q06418 890 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 CETN1Q12798 172 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 CCDC142Q17RM4 750 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 MGAT5BQ3V5L5 792 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 CFAP221Q4G0U5 840 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 C4orf50Q6ZRC1 276 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 UNC93AQ86WB7 457 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 SPATA2LQ8IUW3 424 aaPredicted RBP17.84■□□□□ 0.45
CLK3-207ENST00000562389 B3GALNT2Q8NCR0 500 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 MYCBPAPQ8TBZ2 947 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 MYLPFQ96A32 169 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 RPGRIP1Q96KN7 1286 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 SEPT5Q99719 369 aaPredicted RBP17.84■□□□□ 0.45
CLK3-207ENST00000562389 DNAJC25Q9H1X3 360 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 DPEP3Q9H4B8 488 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 FAM124BQ9H5Z6 455 aaPredicted RBP17.84■□□□□ 0.45
CLK3-207ENST00000562389 AVENQ9NQS1 362 aaPredicted RBP17.84■□□□□ 0.45
CLK3-207ENST00000562389 HCFC1R1Q9NWW0 138 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 CEP72Q9P209 647 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 DOCK8Q8NF50 2099 aa17.84■□□□□ 0.45
CLK3-207ENST00000562389 LETM1O95202 739 aaPredicted RBP17.83■□□□□ 0.44
CLK3-207ENST00000562389 PTPN2P17706 415 aa17.83■□□□□ 0.44
CLK3-207ENST00000562389 PTPN1P18031 435 aaKnown RBP17.83■□□□□ 0.44
CLK3-207ENST00000562389 EPHB3P54753 998 aa17.83■□□□□ 0.44
CLK3-207ENST00000562389 PABPC1LQ4VXU2 614 aaKnown RBP17.83■□□□□ 0.44
CLK3-207ENST00000562389 GJD3Q8N144 294 aa17.83■□□□□ 0.44
CLK3-207ENST00000562389 PCED1BQ96HM7 432 aa17.83■□□□□ 0.44
CLK3-207ENST00000562389 TNIP3Q96KP6 325 aa17.83■□□□□ 0.44
CLK3-207ENST00000562389 ZNF512Q96ME7 567 aaPredicted RBP17.83■□□□□ 0.44
CLK3-207ENST00000562389 MAGEC2Q9UBF1 373 aaPredicted RBP17.83■□□□□ 0.44
CLK3-207ENST00000562389 NFE2L3Q9Y4A8 694 aa17.83■□□□□ 0.44
CLK3-207ENST00000562389 ASB3Q9Y575 518 aa17.83■□□□□ 0.44
CLK3-207ENST00000562389 C2CD4DB7Z1M9 353 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 CILPO75339 1184 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 SOAT2O75908 522 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 RHOP08100 348 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 ATF6P18850 670 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 FSHRP23945 695 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 MAGEA11P43364 429 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 MTIF2P46199 727 aaKnown RBP17.82■□□□□ 0.44
CLK3-207ENST00000562389 CDR1P51861 262 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 NDST1P52848 882 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 NTHL1P78549 312 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 SKOR2Q2VWA4 1001 aaPredicted RBP17.82■□□□□ 0.44
CLK3-207ENST00000562389 MDH1BQ5I0G3 518 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 IQCEQ6IPM2 695 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 OTOP3Q7RTS5 596 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 CREBRFQ8IUR6 639 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 TTC39CQ8N584 583 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 TDRD5Q8NAT2 981 aaKnown RBP17.82■□□□□ 0.44
CLK3-207ENST00000562389 LEMD2Q8NC56 503 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 LMO3Q8TAP4 145 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 TATDN2Q93075 761 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 CD320Q9NPF0 282 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 HMGXB4Q9UGU5 601 aa17.82■□□□□ 0.44
CLK3-207ENST00000562389 SP100P23497 879 aaPredicted RBP17.81■□□□□ 0.44
CLK3-207ENST00000562389 CYP2F1P24903 491 aa17.81■□□□□ 0.44
CLK3-207ENST00000562389 SSTR3P32745 418 aaPredicted RBP17.81■□□□□ 0.44
CLK3-207ENST00000562389 EPHA5P54756 1037 aa17.81■□□□□ 0.44
CLK3-207ENST00000562389 CYP27A1Q02318 531 aa17.81■□□□□ 0.44
CLK3-207ENST00000562389 CUL2Q13617 745 aa17.81■□□□□ 0.44
CLK3-207ENST00000562389 VEPH1Q14D04 833 aa17.81■□□□□ 0.44
CLK3-207ENST00000562389 MAN2A1Q16706 1144 aa17.81■□□□□ 0.44
CLK3-207ENST00000562389 VSTM1Q6UX27 236 aa17.81■□□□□ 0.44
CLK3-207ENST00000562389 GET4Q7L5D6 327 aaPredicted RBP17.81■□□□□ 0.44
CLK3-207ENST00000562389 ITIH5Q86UX2 942 aa17.81■□□□□ 0.44
CLK3-207ENST00000562389 ZDHHC14Q8IZN3 488 aa17.81■□□□□ 0.44
CLK3-207ENST00000562389 CRYBG2Q8N1P7 616 aa17.81■□□□□ 0.44
CLK3-207ENST00000562389 PSMG2Q969U7 264 aa17.81■□□□□ 0.44
CLK3-207ENST00000562389 ACSF2Q96CM8 615 aaPredicted RBP17.81■□□□□ 0.44
CLK3-207ENST00000562389 NT5C1BQ96P26 610 aa17.81■□□□□ 0.44
CLK3-207ENST00000562389 CORO1BQ9BR76 489 aa17.81■□□□□ 0.44
CLK3-207ENST00000562389 ASAH2Q9NR71 780 aa17.81■□□□□ 0.44
CLK3-207ENST00000562389 SAMSN1Q9NSI8 373 aaKnown RBP17.81■□□□□ 0.44
CLK3-207ENST00000562389 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.81■□□□□ 0.44
CLK3-207ENST00000562389 GREB1Q4ZG55 1949 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 KCNJ18B7U540 433 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 CD58P19256 250 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 TRIM21P19474 475 aaKnown RBP17.8■□□□□ 0.44
CLK3-207ENST00000562389 TBXAS1P24557 533 aaPredicted RBP17.8■□□□□ 0.44
CLK3-207ENST00000562389 EEF1GP26641 437 aaKnown RBP17.8■□□□□ 0.44
CLK3-207ENST00000562389 RPL10AP62906 217 aaKnown RBP17.8■□□□□ 0.44
CLK3-207ENST00000562389 MYL5Q02045 173 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 KCNJ12Q14500 433 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 PRSS36Q5K4E3 855 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms