RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 ITGB3P05106 788 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 WEE2P0C1S8 567 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 CCL5P13501 91 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 KCNE1P15382 129 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 TCP1P17987 556 aaKnown RBP6.96□□□□□ -1.3
CAPN3-210ENST00000561817 ABCB4P21439 1286 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 RAD23BP54727 409 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 INCA1Q0VD86 236 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 FOXD4Q12950 439 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-210ENST00000561817 TRPC3Q13507 836 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 TMEM132DQ14C87 1099 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 IFI16Q16666 785 aaKnown RBP6.96□□□□□ -1.3
CAPN3-210ENST00000561817 ZNF699Q32M78 642 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 FAM26DQ5JW98 314 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 ZFYVE27Q5T4F4 411 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 C11orf63Q6NUN7 778 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 TMEM270Q6UE05 265 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 TRIM72Q6ZMU5 477 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 MON1BQ7L1V2 547 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 PHF13Q86YI8 300 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-210ENST00000561817 RHOT2Q8IXI1 618 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 MCOLN2Q8IZK6 566 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 WDTC1Q8N5D0 677 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 SLC43A3Q8NBI5 491 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 ARRDC4Q8NCT1 418 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 MNS1Q8NEH6 495 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 ZNF606Q8WXB4 792 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 CTNNBL1Q8WYA6 563 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-210ENST00000561817 TFAP2BQ92481 460 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 GOLGA1Q92805 767 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 CD101Q93033 1021 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 ITPKCQ96DU7 683 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 CYFIP2Q96F07 1278 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 SCLT1Q96NL6 688 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 TWNKQ96RR1 684 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 ADPGKQ9BRR6 497 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 CCDC94Q9BW85 323 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-210ENST00000561817 ELOVL4Q9GZR5 314 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 RNF208Q9H0X6 261 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 EPC1Q9H2F5 836 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 NXF3Q9H4D5 531 aaKnown RBP6.96□□□□□ -1.3
CAPN3-210ENST00000561817 SMYD3Q9H7B4 428 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 ZFAND3Q9H8U3 227 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 ANKZF1Q9H8Y5 726 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 CYP3A43Q9HB55 503 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 DPP3Q9NY33 737 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 SMARCAL1Q9NZC9 954 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 DDX20Q9UHI6 824 aaKnown RBP6.96□□□□□ -1.3
CAPN3-210ENST00000561817 PUF60Q9UHX1 559 aaKnown RBP6.96□□□□□ -1.3
CAPN3-210ENST00000561817 TMEM59LQ9UK28 342 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 ITGA11Q9UKX5 1188 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 PACSIN2Q9UNF0 486 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-210ENST00000561817 HES2Q9Y543 173 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 NME7Q9Y5B8 376 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 TRPV2Q9Y5S1 764 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 CDY2AQ9Y6F7 541 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 CTAGE15A4D2H0 777 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 PIRO00625 290 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 SH3BP5O60239 455 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 CILPO75339 1184 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 RECQL4O94761 1208 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 UPP2O95045 317 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 CTAGE8P0CG41 777 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 GNA15P30679 374 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 POLR2BP30876 1174 aaKnown RBP6.95□□□□□ -1.3
CAPN3-210ENST00000561817 CXCR5P32302 372 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 NOP2P46087 812 aaKnown RBP6.95□□□□□ -1.3
CAPN3-210ENST00000561817 RAP1GAPP47736 663 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 PEX5P50542 639 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 CDH8P55286 799 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 RBP5P82980 135 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 DSC3Q14574 896 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 ZNF667Q5HYK9 610 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 DCAF12L1Q5VU92 463 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 NAA35Q5VZE5 725 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 FBXO38Q6PIJ6 1188 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 CTAGE6Q86UF2 777 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 CPNE8Q86YQ8 564 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 CTAGE4Q8IX94 777 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 RASGEF1CQ8N431 466 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 MMGT1Q8N4V1 131 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 GPR161Q8N6U8 529 aaKnown RBP6.95□□□□□ -1.3
CAPN3-210ENST00000561817 SLC4A11Q8NBS3 891 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 CPA5Q8WXQ8 436 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 C18orf25Q96B23 403 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-210ENST00000561817 HPDLQ96IR7 371 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 MS4A14Q96JA4 679 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 VCPIP1Q96JH7 1222 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 CAPZA3Q96KX2 299 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 TSPAN18Q96SJ8 248 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 C1QTNF2Q9BXJ5 285 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 IMPG2Q9BZV3 1241 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.95□□□□□ -1.3
CAPN3-210ENST00000561817 FAM124BQ9H5Z6 455 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-210ENST00000561817 PIF1Q9H611 641 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 AGO3Q9H9G7 860 aaKnown RBP6.95□□□□□ -1.3
CAPN3-210ENST00000561817 SPC25Q9HBM1 224 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 ERVK-5Q9HDB9 667 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 SEPT11Q9NVA2 429 aaKnown RBP6.95□□□□□ -1.3
CAPN3-210ENST00000561817 EHD2Q9NZN4 543 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms