RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 HEATR6Q6AI08 1181 aaKnown RBP29.09■■■□□ 2.25
SNRPA1-215ENST00000561187 FOXD4L3Q6VB84 417 aaPredicted RBP29.09■■■□□ 2.25
SNRPA1-215ENST00000561187 PRR23BQ6ZRT6 265 aa29.09■■■□□ 2.25
SNRPA1-215ENST00000561187 DGLUCYQ7Z3D6 616 aa29.09■■■□□ 2.25
SNRPA1-215ENST00000561187 TMEM150AQ86TG1 271 aa29.09■■■□□ 2.25
SNRPA1-215ENST00000561187 CACTINQ8WUQ7 758 aaKnown RBP29.09■■■□□ 2.25
SNRPA1-215ENST00000561187 INTS4Q96HW7 963 aaKnown RBP29.09■■■□□ 2.25
SNRPA1-215ENST00000561187 C2orf42Q9NWW7 574 aa29.09■■■□□ 2.25
SNRPA1-215ENST00000561187 MYBPHLA2RUH7 354 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 K7ELQ4 463 aaPredicted RBP29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 HMGA1P17096 107 aaKnown RBP29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 CYP2F1P24903 491 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 CXCL12P48061 93 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 NLRP12P59046 1061 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 SMARCB1Q12824 385 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 ALCAMQ13740 583 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 PPP2R5DQ14738 602 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 TXNDC8Q6A555 127 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 TRIM68Q6AZZ1 485 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 CCDC65Q8IXS2 484 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 CMTM8Q8IZV2 173 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 GPD1LQ8N335 351 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 TFIP11Q9UBB9 837 aaKnown RBP29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 SIX4Q9UIU6 781 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 ITGA11Q9UKX5 1188 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 USP18Q9UMW8 372 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 PTPRJQ12913 1337 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 OBSL1O75147 1896 aa29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 ZNF638Q14966 1978 aaKnown RBP29.08■■■□□ 2.25
SNRPA1-215ENST00000561187 CHURC1-FNTBB4DL54 471 aa29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 AVPR1AP37288 418 aa29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 NASPP49321 788 aaPredicted RBP29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 FNTBP49356 437 aa29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 SRSF5Q13243 272 aaKnown RBP29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 RSPO4Q2I0M5 234 aaPredicted RBP29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 INTS6LQ5JSJ4 861 aaKnown RBP29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 ADGRF2Q8IZF7 708 aa29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 CXorf38Q8TB03 319 aa29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 DHX58Q96C10 678 aa29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 MSANTD3Q96H12 275 aa29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 IER2Q9BTL4 223 aa29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 FAM126AQ9BYI3 521 aaPredicted RBP29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 ZSCAN16Q9H4T2 348 aaPredicted RBP29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 OBP2AQ9NY56 170 aa29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 GTF3C4Q9UKN8 822 aa29.07■■■□□ 2.24
SNRPA1-215ENST00000561187 MYL7Q01449 175 aa29.06■■■□□ 2.24
SNRPA1-215ENST00000561187 RALGPS2Q86X27 583 aaPredicted RBP29.06■■■□□ 2.24
SNRPA1-215ENST00000561187 CBWD2Q8IUF1 395 aa29.06■■■□□ 2.24
SNRPA1-215ENST00000561187 CELF5Q8N6W0 485 aaKnown RBP29.06■■■□□ 2.24
SNRPA1-215ENST00000561187 LRRC52Q8N7C0 313 aa29.06■■■□□ 2.24
SNRPA1-215ENST00000561187 LINC00301Q8NCQ3 95 aa29.06■■■□□ 2.24
SNRPA1-215ENST00000561187 OR5B17Q8NGF7 314 aa29.06■■■□□ 2.24
SNRPA1-215ENST00000561187 RIN3Q8TB24 985 aa29.06■■■□□ 2.24
SNRPA1-215ENST00000561187 SECISBP2LQ93073 1101 aaKnown RBP29.06■■■□□ 2.24
SNRPA1-215ENST00000561187 TMEM206Q9H813 350 aa29.06■■■□□ 2.24
SNRPA1-215ENST00000561187 TRPC7Q9HCX4 862 aa29.06■■■□□ 2.24
SNRPA1-215ENST00000561187 GMEB2Q9UKD1 530 aa29.06■■■□□ 2.24
SNRPA1-215ENST00000561187 DENND4CQ5VZ89 1909 aa29.05■■■□□ 2.24
SNRPA1-215ENST00000561187 MED19A0JLT2 244 aaPredicted RBP29.05■■■□□ 2.24
SNRPA1-215ENST00000561187 SPTLC2O15270 562 aa29.05■■■□□ 2.24
SNRPA1-215ENST00000561187 F11P03951 625 aa29.05■■■□□ 2.24
SNRPA1-215ENST00000561187 ASIC1P78348 528 aa29.05■■■□□ 2.24
SNRPA1-215ENST00000561187 RBP5P82980 135 aa29.05■■■□□ 2.24
SNRPA1-215ENST00000561187 NFE2Q16621 373 aaPredicted RBP29.05■■■□□ 2.24
SNRPA1-215ENST00000561187 SCN4BQ8IWT1 228 aa29.05■■■□□ 2.24
SNRPA1-215ENST00000561187 SPEM1Q8N4L4 309 aa29.05■■■□□ 2.24
SNRPA1-215ENST00000561187 USP13Q92995 863 aaPredicted RBP29.05■■■□□ 2.24
SNRPA1-215ENST00000561187 ANKRD36BP1Q96IX9 119 aa29.05■■■□□ 2.24
SNRPA1-215ENST00000561187 EBF3Q9H4W6 596 aa29.05■■■□□ 2.24
SNRPA1-215ENST00000561187 GKN1Q9NS71 199 aa29.05■■■□□ 2.24
SNRPA1-215ENST00000561187 THG1LQ9NWX6 298 aaKnown RBP29.05■■■□□ 2.24
SNRPA1-215ENST00000561187 RAB23Q9ULC3 237 aa29.05■■■□□ 2.24
SNRPA1-215ENST00000561187 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.04■■■□□ 2.24
SNRPA1-215ENST00000561187 TADA3O75528 432 aa29.04■■■□□ 2.24
SNRPA1-215ENST00000561187 NRLP54845 237 aa29.04■■■□□ 2.24
SNRPA1-215ENST00000561187 PSMC1P62191 440 aaKnown RBP29.04■■■□□ 2.24
SNRPA1-215ENST00000561187 PLCB2Q00722 1185 aa29.04■■■□□ 2.24
SNRPA1-215ENST00000561187 ITPRIPL2Q3MIP1 535 aa29.04■■■□□ 2.24
SNRPA1-215ENST00000561187 C1orf228Q6PIY5 440 aa29.04■■■□□ 2.24
SNRPA1-215ENST00000561187 MRPS31Q92665 395 aaKnown RBP29.04■■■□□ 2.24
SNRPA1-215ENST00000561187 ACBD6Q9BR61 282 aa29.04■■■□□ 2.24
SNRPA1-215ENST00000561187 R3HCC1Q9Y3T6 440 aaKnown RBP29.04■■■□□ 2.24
SNRPA1-215ENST00000561187 CSH1P0DML2 217 aa29.03■■■□□ 2.24
SNRPA1-215ENST00000561187 CSH2P0DML3 217 aa29.03■■■□□ 2.24
SNRPA1-215ENST00000561187 MLLT6P55198 1093 aaPredicted RBP29.03■■■□□ 2.24
SNRPA1-215ENST00000561187 E2F4Q16254 413 aa29.03■■■□□ 2.24
SNRPA1-215ENST00000561187 SPATA2LQ8IUW3 424 aaPredicted RBP29.03■■■□□ 2.24
SNRPA1-215ENST00000561187 TMEM86AQ8N2M4 240 aa29.03■■■□□ 2.24
SNRPA1-215ENST00000561187 BACH2Q9BYV9 841 aa29.03■■■□□ 2.24
SNRPA1-215ENST00000561187 TRIM9Q9C026 710 aa29.03■■■□□ 2.24
SNRPA1-215ENST00000561187 TNMDQ9H2S6 317 aa29.03■■■□□ 2.24
SNRPA1-215ENST00000561187 PARD6AQ9NPB6 346 aa29.03■■■□□ 2.24
SNRPA1-215ENST00000561187 HPS4Q9NQG7 708 aa29.03■■■□□ 2.24
SNRPA1-215ENST00000561187 HSPBP1Q9NZL4 362 aa29.03■■■□□ 2.24
SNRPA1-215ENST00000561187 MORC2Q9Y6X9 1032 aaPredicted RBP29.03■■■□□ 2.24
SNRPA1-215ENST00000561187 ATP2C2O75185 946 aa29.02■■■□□ 2.24
SNRPA1-215ENST00000561187 ARSAP15289 507 aa29.02■■■□□ 2.24
SNRPA1-215ENST00000561187 CASP1P29466 404 aa29.02■■■□□ 2.24
SNRPA1-215ENST00000561187 PUM1Q14671 1186 aaKnown RBP eCLIP29.02■■■□□ 2.24
SNRPA1-215ENST00000561187 SOWAHAQ2M3V2 549 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms