RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 NAT14Q8WUY8 206 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 PYDC1Q8WXC3 89 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 PPP2R3CQ969Q6 453 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 MTBPQ96DY7 904 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 ZNF577Q9BSK1 485 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 GPRC5CQ9NQ84 441 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 AVENQ9NQS1 362 aaPredicted RBP17.31■□□□□ 0.36
TPM1-228ENST00000560975 RAB20Q9NX57 234 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 STK32BQ9NY57 414 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 SLC4A7Q9Y6M7 1214 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 GNPATO15228 680 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 BBS9Q3SYG4 887 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.31■□□□□ 0.36
TPM1-228ENST00000560975 NET1Q7Z628 596 aaPredicted RBP17.31■□□□□ 0.36
TPM1-228ENST00000560975 MYLK4Q86YV6 388 aaPredicted RBP17.31■□□□□ 0.36
TPM1-228ENST00000560975 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.31■□□□□ 0.36
TPM1-228ENST00000560975 SMC1BQ8NDV3 1235 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 FBXL13Q8NEE6 735 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 EXD1Q8NHP7 514 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 ZNF395Q9H8N7 513 aaPredicted RBP17.31■□□□□ 0.36
TPM1-228ENST00000560975 RHBDL2Q9NX52 303 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 SAE1Q9UBE0 346 aaPredicted RBP17.31■□□□□ 0.36
TPM1-228ENST00000560975 MYPNQ86TC9 1320 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 CRABP2P29373 138 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 LPCAT4Q643R3 524 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 ADGRD1Q6QNK2 874 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 PALM2Q8IXS6 379 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 FBXO36Q8NEA4 188 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 MZB1Q8WU39 189 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 MKL1Q969V6 931 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 SERAC1Q96JX3 654 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 DNAJC1Q96KC8 554 aaKnown RBP17.3■□□□□ 0.36
TPM1-228ENST00000560975 MECRQ9BV79 373 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 SSU72Q9NP77 194 aaKnown RBP17.3■□□□□ 0.36
TPM1-228ENST00000560975 DNAAF2Q9NVR5 837 aaKnown RBP17.3■□□□□ 0.36
TPM1-228ENST00000560975 CCDC195A0A1B0GUA6 201 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 F8W8V4 182 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 TXNDC9O14530 226 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 TLR3O15455 904 aaKnown RBP17.3■□□□□ 0.36
TPM1-228ENST00000560975 MAGEC1O60732 1142 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 STK10O94804 968 aaKnown RBP17.3■□□□□ 0.36
TPM1-228ENST00000560975 GDF11O95390 407 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 DSG3P32926 999 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 PHBP35232 272 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 ALDH18A1P54886 795 aaKnown RBP17.3■□□□□ 0.36
TPM1-228ENST00000560975 PEX3P56589 373 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 DYNLT1P63172 113 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 GSTCDQ8NEC7 633 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 FAM81BQ96LP2 452 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 OLFM3Q96PB7 478 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 HAPLN3Q96S86 360 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 KIFC3Q9BVG8 833 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 ACTR3P61158 418 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 ALCAMQ13740 583 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 CCDC142Q17RM4 750 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 TRMT5Q32P41 509 aaKnown RBP17.3■□□□□ 0.36
TPM1-228ENST00000560975 LMBRD2Q68DH5 695 aaPredicted RBP17.3■□□□□ 0.36
TPM1-228ENST00000560975 SDCCAG8Q86SQ7 713 aaPredicted RBP17.3■□□□□ 0.36
TPM1-228ENST00000560975 PRPF39Q86UA1 669 aaKnown RBP17.3■□□□□ 0.36
TPM1-228ENST00000560975 ATP11CQ8NB49 1132 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 DCAKDQ8WVC6 231 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 MPP4Q96JB8 637 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 SMYD3Q9H7B4 428 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 RPS6KL1Q9Y6S9 549 aa17.3■□□□□ 0.36
TPM1-228ENST00000560975 SPECC1L-ADORA2AF8WAN1 911 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 TM7SF2O76062 418 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 VAV1P15498 845 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 PTP4A2Q12974 167 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 SFT2D3Q587I9 215 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 SYCP2LQ5T4T6 812 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 AMIGO3Q86WK7 504 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 ARID3BQ8IVW6 561 aaPredicted RBP17.29■□□□□ 0.36
TPM1-228ENST00000560975 OGFOD1Q8N543 542 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 HIPK4Q8NE63 616 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 KAT6AQ92794 2004 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 ARHGAP42A6NI28 874 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 PGM3O95394 542 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 NDUFB10O96000 172 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 GPC3P51654 580 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 HSPA2P54652 639 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 MAMLD1Q13495 774 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 LIN9Q5TKA1 542 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 SV2AQ7L0J3 742 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 LCA5Q86VQ0 697 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 OR6Y1Q8NGX8 325 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 SLITRK1Q96PX8 696 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 WDR83Q9BRX9 315 aaKnown RBP17.29■□□□□ 0.36
TPM1-228ENST00000560975 TMEM8AQ9HCN3 771 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 KCND2Q9NZV8 630 aa17.29■□□□□ 0.36
TPM1-228ENST00000560975 BUD23O43709 281 aaKnown RBP17.28■□□□□ 0.36
TPM1-228ENST00000560975 FAM200BP0CF97 657 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 MED21Q13503 144 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 DLGAP5Q15398 846 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 SIAH1Q8IUQ4 282 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 POLLQ9UGP5 575 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 SHOC2Q9UQ13 582 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 CHMP2BQ9UQN3 213 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 TCRBV7S3A2A0A539 114 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 TGDSO95455 350 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms