RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 CASQ1P31415 396 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 MAGEA1P43355 309 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 ASPAP45381 313 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 RBP5P82980 135 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 CYP27A1Q02318 531 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 BMS1Q14692 1282 aaKnown RBP8.6□□□□□ -1.03
CPNE6-218ENST00000560845 DUSP6Q16828 381 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 XKR4Q5GH76 650 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 SPOUT1Q5T280 376 aaKnown RBP8.6□□□□□ -1.03
CPNE6-218ENST00000560845 SMYD5Q6GMV2 418 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 UBR7Q8N806 425 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 RBBP8NLQ8NC74 664 aaPredicted RBP8.6□□□□□ -1.03
CPNE6-218ENST00000560845 CXorf38Q8TB03 319 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 MICAL1Q8TDZ2 1067 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 EPS8L1Q8TE68 723 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 SLC20A1Q8WUM9 679 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 FAXDC2Q96IV6 333 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 CDCA3Q99618 268 aaPredicted RBP8.6□□□□□ -1.03
CPNE6-218ENST00000560845 ADAM2Q99965 735 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 SYT11Q9BT88 431 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 TRAIPQ9BWF2 469 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 RNF39Q9H2S5 420 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 VRTNQ9H8Y1 702 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 LZTFL1Q9NQ48 299 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 AAASQ9NRG9 546 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 SEPT11Q9NVA2 429 aaKnown RBP8.6□□□□□ -1.03
CPNE6-218ENST00000560845 KLK14Q9P0G3 267 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 NXF1Q9UBU9 619 aaKnown RBP8.6□□□□□ -1.03
CPNE6-218ENST00000560845 ADAMTS1Q9UHI8 967 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 AGAP1Q9UPQ3 857 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 PCDHB7Q9Y5E2 793 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 PCDHB4Q9Y5E5 795 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 PCDHA13Q9Y5I0 950 aa8.6□□□□□ -1.03
CPNE6-218ENST00000560845 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.6□□□□□ -1.03
CPNE6-218ENST00000560845 KIAA1671Q9BY89 1806 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 SMIM28A0A1B0GU29 152 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 TBKBP1A7MCY6 615 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 DDX3XO00571 662 aaKnown RBP eCLIP8.59□□□□□ -1.03
CPNE6-218ENST00000560845 FSCN2O14926 492 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 KRT86O43790 486 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 KIF5CO60282 957 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 URI1O94763 535 aaPredicted RBP8.59□□□□□ -1.03
CPNE6-218ENST00000560845 SRGAP2BP0DMP2 458 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 SKIP12755 728 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 CYP11B1P15538 503 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 CD58P19256 250 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 CYP3A5P20815 502 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 TNFAIP3P21580 790 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 AVPR2P30518 371 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 MLH1P40692 756 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 BPIFB4P59827 614 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 ERVFC1P60507 584 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 TNNC1P63316 161 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 AMPD2Q01433 879 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 KIF5AQ12840 1032 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 MYO1EQ12965 1108 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 ZBTB6Q15916 424 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 CCDC122Q5T0U0 273 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 C10orf76Q5T2E6 689 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 TAF3Q5VWG9 929 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 SCARA3Q6AZY7 606 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 PDE12Q6L8Q7 609 aaKnown RBP8.59□□□□□ -1.03
CPNE6-218ENST00000560845 TMEM270Q6UE05 265 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 ALKAL1Q6UXT8 129 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 ZNF662Q6ZS27 426 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 MRPL10Q7Z7H8 261 aaKnown RBP8.59□□□□□ -1.03
CPNE6-218ENST00000560845 NOP9Q86U38 636 aaKnown RBP8.59□□□□□ -1.03
CPNE6-218ENST00000560845 SLC47A2Q86VL8 602 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 GLYCTKQ8IVS8 523 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 SLC35F6Q8N357 371 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 TMEM130Q8N3G9 435 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 LRRC52Q8N7C0 313 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 COLGALT1Q8NBJ5 622 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 RNF169Q8NCN4 708 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 OLIG1Q8TAK6 271 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 LNX1Q8TBB1 728 aaPredicted RBP8.59□□□□□ -1.03
CPNE6-218ENST00000560845 ATOH1Q92858 354 aaPredicted RBP8.59□□□□□ -1.03
CPNE6-218ENST00000560845 C18orf25Q96B23 403 aaPredicted RBP8.59□□□□□ -1.03
CPNE6-218ENST00000560845 PGBD4Q96DM1 585 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 HPDLQ96IR7 371 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 ZNF560Q96MR9 790 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 AGPAT1Q99943 283 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 BCO2Q9BYV7 579 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 IRF2BPLQ9H1B7 796 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 CXCL16Q9H2A7 254 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 SMYD3Q9H7B4 428 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 SLC38A7Q9NVC3 462 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 HCSTQ9UBK5 93 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 NOCTQ9UK39 431 aaKnown RBP8.59□□□□□ -1.03
CPNE6-218ENST00000560845 NENFQ9UMX5 172 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 POLIQ9UNA4 740 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 GIT1Q9Y2X7 761 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 KMT2EQ8IZD2 1858 aa8.59□□□□□ -1.03
CPNE6-218ENST00000560845 A0A0U1RQF3 1178 aa8.58□□□□□ -1.04
CPNE6-218ENST00000560845 RCCD1A6NED2 376 aa8.58□□□□□ -1.04
CPNE6-218ENST00000560845 MEIS3P2A8K0S8 358 aa8.58□□□□□ -1.04
CPNE6-218ENST00000560845 C9IYK1 514 aa8.58□□□□□ -1.04
CPNE6-218ENST00000560845 PTGESO14684 152 aa8.58□□□□□ -1.04
CPNE6-218ENST00000560845 PPEF2O14830 753 aa8.58□□□□□ -1.04
CPNE6-218ENST00000560845 ZNF623O75123 536 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms