RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ALDH1A3P47895 512 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 SCARA3Q6AZY7 606 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 IQCEQ6IPM2 695 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 VSTM1Q6UX27 236 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 TMC5Q6UXY8 1006 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 ADHFE1Q8IWW8 467 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 JAKMIP2Q96AA8 810 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 PKMYT1Q99640 499 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 WDR6Q9NNW5 1121 aaKnown RBP14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 AVENQ9NQS1 362 aaPredicted RBP14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 NR2E1Q9Y466 385 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 ZFP37Q9Y6Q3 630 aaPredicted RBP14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 SMTNL1A8MU46 457 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 RFPL2O75678 378 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 MICAL2O94851 1124 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 FGF19O95750 216 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 SPATA31D3P0C874 917 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 MAGEA11P43364 429 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 KCNQ1P51787 676 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 EPHB3P54753 998 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 VEPH1Q14D04 833 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 NCAPHQ15003 741 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 CLUL1Q15846 466 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 SPATA31D4Q6ZUB0 917 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 ITIH5Q86UX2 942 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 IRF2BP1Q8IU81 584 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 AOPEPQ8N6M6 819 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 MYCBPAPQ8TBZ2 947 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 ZNF707Q96C28 371 aaPredicted RBP14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 NT5C1BQ96P26 610 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 SMYD3Q9H7B4 428 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 YIPF1Q9Y548 306 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 ATP8B3O60423 1300 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 XIRP2A4UGR9 3374 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 KCNJ18B7U540 433 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 GOLGA6L19H0YKK7 550 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 OR4Q2P0C623 313 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 ZNF75DP51815 510 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 RPL10AP62906 217 aaKnown RBP14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 GCNT1Q02742 428 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 DUSP4Q13115 394 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 KCNJ12Q14500 433 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 MGAT5BQ3V5L5 792 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 TCP11X2Q5H9J9 407 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 CDKAL1Q5VV42 579 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 ENOSF1Q7L5Y1 443 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 OSTM1Q86WC4 334 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 SPATA2LQ8IUW3 424 aaPredicted RBP14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 CRYBG2Q8N1P7 616 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 PLCD3Q8N3E9 789 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 B3GALNT2Q8NCR0 500 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 SEMA4DQ92854 862 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 ZNF512Q96ME7 567 aaPredicted RBP14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 MRPL45Q9BRJ2 306 aaKnown RBP14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 TUBGCP2Q9BSJ2 902 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 PI4K2AQ9BTU6 479 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 NT5C1AQ9BXI3 368 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 ELOVL4Q9GZR5 314 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 APOBEC3GQ9HC16 384 aaKnown RBP14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 EHD2Q9NZN4 543 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 POLIQ9UNA4 740 aa14.91□□□□□ -0.02
PKNOX1-209ENST00000560448 BECN2A8MW95 431 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 ZNF197O14709 1029 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 CILPO75339 1184 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 SEC24AO95486 1093 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 HAPLN1P10915 354 aaPredicted RBP14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 IL9P15248 144 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 PTPN2P17706 415 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 PTPN1P18031 435 aaKnown RBP14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 LMO2P25791 158 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 GBP6Q6ZN66 633 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 OTOP3Q7RTS5 596 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 LRRTM3Q86VH5 581 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 CREBRFQ8IUR6 639 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 C12orf76Q8N812 135 aaPredicted RBP14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 ATAD1Q8NBU5 361 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 ACSF2Q96CM8 615 aaPredicted RBP14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 PGLYRP2Q96PD5 576 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 TMEM209Q96SK2 561 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 NDST4Q9H3R1 872 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 ABI2Q9NYB9 513 aaPredicted RBP14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 ZMYM5Q9UJ78 669 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 GTF3C4Q9UKN8 822 aa14.9□□□□□ -0.02
PKNOX1-209ENST00000560448 CLUHO75153 1309 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 TRIM66O15016 1216 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 VNN2O95498 520 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 PDGFRBP09619 1106 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 ACAT1P24752 427 aaKnown RBP14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 EPHA5P54756 1037 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 PLCB2Q00722 1185 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 TWF1Q12792 350 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 CUL2Q13617 745 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 VWA3BQ502W6 1294 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 CYP4A22Q5TCH4 519 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 SPOPLQ6IQ16 392 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 SCARA5Q6ZMJ2 495 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 EHBP1Q8NDI1 1231 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 LMO3Q8TAP4 145 aa14.89□□□□□ -0.03
PKNOX1-209ENST00000560448 PSMG2Q969U7 264 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms