RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 GTF3C4Q9UKN8 822 aa17.98■□□□□ 0.47
RPL28-209ENST00000560055 NFE2L3Q9Y4A8 694 aa17.98■□□□□ 0.47
RPL28-209ENST00000560055 YIPF1Q9Y548 306 aa17.98■□□□□ 0.47
RPL28-209ENST00000560055 XYLBO75191 536 aa17.97■□□□□ 0.47
RPL28-209ENST00000560055 CLSTN1O94985 981 aa17.97■□□□□ 0.47
RPL28-209ENST00000560055 PDGFRBP09619 1106 aa17.97■□□□□ 0.47
RPL28-209ENST00000560055 PSMC1P62191 440 aaKnown RBP17.97■□□□□ 0.47
RPL28-209ENST00000560055 SKOR2Q2VWA4 1001 aaPredicted RBP17.97■□□□□ 0.47
RPL28-209ENST00000560055 FAM114A1Q8IWE2 563 aa17.97■□□□□ 0.47
RPL28-209ENST00000560055 ADHFE1Q8IWW8 467 aa17.97■□□□□ 0.47
RPL28-209ENST00000560055 TATDN2Q93075 761 aa17.97■□□□□ 0.47
RPL28-209ENST00000560055 FUBP3Q96I24 572 aaKnown RBP eCLIP17.97■□□□□ 0.47
RPL28-209ENST00000560055 DPEP3Q9H4B8 488 aa17.97■□□□□ 0.47
RPL28-209ENST00000560055 SAMSN1Q9NSI8 373 aaKnown RBP17.97■□□□□ 0.47
RPL28-209ENST00000560055 SLC27A5Q9Y2P5 690 aa17.97■□□□□ 0.47
RPL28-209ENST00000560055 PCDHB5Q9Y5E4 795 aa17.97■□□□□ 0.47
RPL28-209ENST00000560055 DENND4AQ7Z401 1863 aa17.97■□□□□ 0.47
RPL28-209ENST00000560055 DOCK6Q96HP0 2047 aa17.96■□□□□ 0.47
RPL28-209ENST00000560055 C19orf67A6NJJ6 358 aa17.96■□□□□ 0.47
RPL28-209ENST00000560055 A8MXQ7 604 aa17.96■□□□□ 0.47
RPL28-209ENST00000560055 LETM1O95202 739 aaPredicted RBP17.96■□□□□ 0.47
RPL28-209ENST00000560055 LRG1P02750 347 aa17.96■□□□□ 0.47
RPL28-209ENST00000560055 CDR1P51861 262 aa17.96■□□□□ 0.47
RPL28-209ENST00000560055 TWF1Q12792 350 aa17.96■□□□□ 0.47
RPL28-209ENST00000560055 CFAP221Q4G0U5 840 aa17.96■□□□□ 0.47
RPL28-209ENST00000560055 WDR44Q5JSH3 913 aa17.96■□□□□ 0.47
RPL28-209ENST00000560055 CDKAL1Q5VV42 579 aa17.96■□□□□ 0.47
RPL28-209ENST00000560055 UNC93AQ86WB7 457 aa17.96■□□□□ 0.47
RPL28-209ENST00000560055 B3GALNT2Q8NCR0 500 aa17.96■□□□□ 0.47
RPL28-209ENST00000560055 MYCBPAPQ8TBZ2 947 aa17.96■□□□□ 0.47
RPL28-209ENST00000560055 FAM124BQ9H5Z6 455 aaPredicted RBP17.96■□□□□ 0.47
RPL28-209ENST00000560055 ABI2Q9NYB9 513 aaPredicted RBP17.96■□□□□ 0.47
RPL28-209ENST00000560055 CEP72Q9P209 647 aa17.96■□□□□ 0.47
RPL28-209ENST00000560055 HMGXB4Q9UGU5 601 aa17.96■□□□□ 0.47
RPL28-209ENST00000560055 CLUHO75153 1309 aa17.96■□□□□ 0.46
RPL28-209ENST00000560055 NOTCH4Q99466 2003 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 SOAT2O75908 522 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 HAPLN1P10915 354 aaPredicted RBP17.95■□□□□ 0.46
RPL28-209ENST00000560055 PTPN1P18031 435 aaKnown RBP17.95■□□□□ 0.46
RPL28-209ENST00000560055 COL9A1P20849 921 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 TUFMP49411 452 aaKnown RBP17.95■□□□□ 0.46
RPL28-209ENST00000560055 MYL5Q02045 173 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 CETN1Q12798 172 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 PLD1Q13393 1074 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 NCAPHQ15003 741 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 MAPRE1Q15691 268 aaKnown RBP17.95■□□□□ 0.46
RPL28-209ENST00000560055 MAN2A1Q16706 1144 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 HSP90AA4PQ58FG1 418 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 MIIPQ5JXC2 388 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 GRASPQ7Z6J2 395 aaPredicted RBP17.95■□□□□ 0.46
RPL28-209ENST00000560055 MYLPFQ96A32 169 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 PCED1BQ96HM7 432 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 ARID3AQ99856 593 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 LPIN3Q9BQK8 851 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 BPIFA3Q9BQP9 254 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 PIDD1Q9HB75 910 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 AVENQ9NQS1 362 aaPredicted RBP17.95■□□□□ 0.46
RPL28-209ENST00000560055 HCFC1R1Q9NWW0 138 aa17.95■□□□□ 0.46
RPL28-209ENST00000560055 DNMT3BQ9UBC3 853 aaKnown RBP17.95■□□□□ 0.46
RPL28-209ENST00000560055 SYCE3A1L190 88 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 KCNJ18B7U540 433 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 LOC730098B7Z3J9 87 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 CILPO75339 1184 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 ATF6P18850 670 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 EEF1GP26641 437 aaKnown RBP17.94■□□□□ 0.46
RPL28-209ENST00000560055 MTIF2P46199 727 aaKnown RBP17.94■□□□□ 0.46
RPL28-209ENST00000560055 NDST1P52848 882 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 CUL2Q13617 745 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 KCNJ12Q14500 433 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 NFKBIBQ15653 356 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 MGAT5BQ3V5L5 792 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 ANO6Q4KMQ2 910 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 TCP11X2Q5H9J9 407 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 MDH1BQ5I0G3 518 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 C4orf50Q6ZRC1 276 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 CREBRFQ8IUR6 639 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 SPATA2LQ8IUW3 424 aaPredicted RBP17.94■□□□□ 0.46
RPL28-209ENST00000560055 CRYBG2Q8N1P7 616 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 EHBP1Q8NDI1 1231 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 WHAMMQ8TF30 809 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 TNIP3Q96KP6 325 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 TWNKQ96RR1 684 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 SEPT5Q99719 369 aaPredicted RBP17.94■□□□□ 0.46
RPL28-209ENST00000560055 TUBGCP2Q9BSJ2 902 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 HSD3B7Q9H2F3 369 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 MAGEC2Q9UBF1 373 aaPredicted RBP17.94■□□□□ 0.46
RPL28-209ENST00000560055 USTQ9Y2C2 406 aa17.94■□□□□ 0.46
RPL28-209ENST00000560055 GTPBP10A4D1E9 387 aaKnown RBP17.93■□□□□ 0.46
RPL28-209ENST00000560055 RHOP08100 348 aa17.93■□□□□ 0.46
RPL28-209ENST00000560055 CYP2F1P24903 491 aa17.93■□□□□ 0.46
RPL28-209ENST00000560055 MAGEA11P43364 429 aa17.93■□□□□ 0.46
RPL28-209ENST00000560055 ALDH1A3P47895 512 aa17.93■□□□□ 0.46
RPL28-209ENST00000560055 EPHA5P54756 1037 aa17.93■□□□□ 0.46
RPL28-209ENST00000560055 NTHL1P78549 312 aa17.93■□□□□ 0.46
RPL28-209ENST00000560055 GJD3Q8N144 294 aa17.93■□□□□ 0.46
RPL28-209ENST00000560055 TTC39CQ8N584 583 aa17.93■□□□□ 0.46
RPL28-209ENST00000560055 UBR7Q8N806 425 aa17.93■□□□□ 0.46
RPL28-209ENST00000560055 CISHQ9NSE2 258 aa17.93■□□□□ 0.46
RPL28-209ENST00000560055 FANCLQ9NW38 375 aa17.93■□□□□ 0.46
RPL28-209ENST00000560055 TRIOO75962 3097 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms