RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 OASLQ15646 514 aaKnown RBP8.53□□□□□ -1.04
SMAD3-212ENST00000559937 CNGA2Q16280 664 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 DCAF4L1Q3SXM0 396 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 PTPN20Q4JDL3 420 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 WDR78Q5VTH9 848 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 JADE1Q6IE81 842 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 DENND1BQ6P3S1 775 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 C6orf89Q6UWU4 347 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 MAMDC4Q6UXC1 1216 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 MFSD7Q6UXD7 560 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 SCARA5Q6ZMJ2 495 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 BBS12Q6ZW61 710 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 ANKRD23Q86SG2 305 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 PHLDB2Q86SQ0 1253 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 TADA2BQ86TJ2 420 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 CCDC25Q86WR0 208 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 ZCCHC9Q8N567 271 aaKnown RBP8.53□□□□□ -1.04
SMAD3-212ENST00000559937 ALLCQ8N6M5 410 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 SLC4A11Q8NBS3 891 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 CXorf38Q8TB03 319 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 AFG1LQ8WV93 481 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 TRAPPC12Q8WVT3 735 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 CHMP6Q96FZ7 201 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 NCAPGQ9BPX3 1015 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 ADPGKQ9BRR6 497 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 NSRP1Q9H0G5 558 aaKnown RBP8.53□□□□□ -1.04
SMAD3-212ENST00000559937 ADAM7Q9H2U9 754 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 RNPEPQ9H4A4 650 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 MINDY3Q9H8M7 445 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 PPANQ9NQ55 473 aaKnown RBP8.53□□□□□ -1.04
SMAD3-212ENST00000559937 PDGFCQ9NRA1 345 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 NINJ2Q9NZG7 142 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 POLIQ9UNA4 740 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.53□□□□□ -1.04
SMAD3-212ENST00000559937 SHOC2Q9UQ13 582 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 IVNS1ABPQ9Y6Y0 642 aa8.53□□□□□ -1.04
SMAD3-212ENST00000559937 A0A087WZ62 844 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 IQCA1LA6NCM1 817 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 RRN3P2A6NIE6 340 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 DCDC2CA8MYV0 355 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 F8VP50 259 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 CDH16O75309 829 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 FSBPO95073 299 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 ITGB3P05106 788 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 NFICP08651 508 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 SETSIPP0DME0 302 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 KRT3P12035 628 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 CHN1P15882 459 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 ATF7P17544 494 aaPredicted RBP8.52□□□□□ -1.05
SMAD3-212ENST00000559937 PSMA2P25787 234 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 ADORA2AP29274 412 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 CHKAP35790 457 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 GJC1P36383 396 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 GRM5P41594 1212 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 GTF2A2P52657 109 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 RBP5P82980 135 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 OGDHQ02218 1023 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 SLC25A11Q02978 314 aaKnown RBP8.52□□□□□ -1.05
SMAD3-212ENST00000559937 NR1H3Q13133 447 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 MORF4L2Q15014 288 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 RASA2Q15283 850 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 WDR72Q3MJ13 1102 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 MTHFD1LQ6UB35 978 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 MOB2Q70IA6 237 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 GSTA5Q7RTV2 222 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 PCGF5Q86SE9 256 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 TAX1BP1Q86VP1 789 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 VSIG1Q86XK7 387 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 XYLT1Q86Y38 959 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 TDRPQ86YL5 185 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 C10orf67Q8IYJ2 551 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 CACNA2D3Q8IZS8 1091 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 CEP120Q8N960 986 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 SLC35B2Q8TB61 432 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 EPS8L3Q8TE67 593 aaKnown RBP8.52□□□□□ -1.05
SMAD3-212ENST00000559937 ATXN2LQ8WWM7 1075 aaKnown RBP8.52□□□□□ -1.05
SMAD3-212ENST00000559937 SLC10A4Q96EP9 437 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 TMEM176AQ96HP8 235 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 CFAP57Q96MR6 1250 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 TSPAN18Q96SJ8 248 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 SELENOSQ9BQE4 189 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 FDXACB1Q9BRP7 624 aaPredicted RBP8.52□□□□□ -1.05
SMAD3-212ENST00000559937 HEMGNQ9BXL5 484 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 KATNBL1Q9H079 304 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 SDCBP2Q9H190 292 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 ACTR5Q9H9F9 607 aaPredicted RBP8.52□□□□□ -1.05
SMAD3-212ENST00000559937 EFCC1Q9HA90 598 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 PLEKHA5Q9HAU0 1116 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 LRRC4CQ9HCJ2 640 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 INTS9Q9NV88 658 aaKnown RBP8.52□□□□□ -1.05
SMAD3-212ENST00000559937 ASNSD1Q9NWL6 643 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.52□□□□□ -1.05
SMAD3-212ENST00000559937 BARX2Q9UMQ3 279 aaPredicted RBP8.52□□□□□ -1.05
SMAD3-212ENST00000559937 AKT3Q9Y243 479 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 SCN1AP35498 2009 aa8.52□□□□□ -1.05
SMAD3-212ENST00000559937 LRRD1A4D1F6 860 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 C3orf70A6NLC5 250 aaPredicted RBP8.51□□□□□ -1.05
SMAD3-212ENST00000559937 PI4K2BG5E9Z4 385 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 LRCH4O75427 683 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 RNF8O76064 485 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms