RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 MECOMQ03112 1051 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 CDK18Q07002 472 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 CCNIQ14094 377 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 USP41Q3LFD5 358 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 OGFRL1Q5TC84 451 aaPredicted RBP6.97□□□□□ -1.29
ZEB1-217ENST00000559858 MFSD4BQ5TF39 518 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 ADGRD1Q6QNK2 874 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 CAPN12Q6ZSI9 719 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 DNAJC10Q8IXB1 793 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 ZCRB1Q8TBF4 217 aaKnown RBP6.97□□□□□ -1.29
ZEB1-217ENST00000559858 ARHGEF1Q92888 912 aaKnown RBP6.97□□□□□ -1.29
ZEB1-217ENST00000559858 KCNN1Q92952 543 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 GJA10Q969M2 543 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 SNX27Q96L92 541 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 ORAI2Q96SN7 254 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 REEP2Q9BRK0 252 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 ADAM33Q9BZ11 813 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 OSBPL6Q9BZF3 934 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 UBE2TQ9NPD8 197 aaPredicted RBP6.97□□□□□ -1.29
ZEB1-217ENST00000559858 DNM3Q9UQ16 869 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 TNS2Q63HR2 1409 aa6.97□□□□□ -1.29
ZEB1-217ENST00000559858 UBAP1LF5GYI3 381 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 CYP26A1O43174 497 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 LPXNO60711 386 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 MED24O75448 989 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 MT-ND3P03897 115 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 SERPINB6P35237 376 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 CPOXP36551 454 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 CCR3P51677 355 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 HDAC4P56524 1084 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 NUP107P57740 925 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 ZNF200P98182 395 aaPredicted RBP6.96□□□□□ -1.29
ZEB1-217ENST00000559858 PDAP1Q13442 181 aaKnown RBP6.96□□□□□ -1.29
ZEB1-217ENST00000559858 APOFQ13790 326 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 FASTKD3Q14CZ7 662 aaKnown RBP6.96□□□□□ -1.29
ZEB1-217ENST00000559858 CAVIN4Q5BKX8 364 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 MDH1BQ5I0G3 518 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 HP1BP3Q5SSJ5 553 aaPredicted RBP6.96□□□□□ -1.29
ZEB1-217ENST00000559858 USP17L2Q6R6M4 530 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 POTEHQ6S545 545 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 PYROXD1Q8WU10 500 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 DYNLL2Q96FJ2 89 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 HERPUD2Q9BSE4 406 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 CCDC106Q9BWC9 280 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 C12orf65Q9H3J6 166 aaKnown RBP6.96□□□□□ -1.29
ZEB1-217ENST00000559858 RRN3Q9NYV6 651 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 UBAP1Q9NZ09 502 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 PPP1R1BQ9UD71 204 aaPredicted RBP6.96□□□□□ -1.29
ZEB1-217ENST00000559858 RSL24D1Q9UHA3 163 aaKnown RBP6.96□□□□□ -1.29
ZEB1-217ENST00000559858 RABGEF1Q9UJ41 708 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 STRIP2Q9ULQ0 834 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 SORCS3Q9UPU3 1222 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 INPP5FQ9Y2H2 1132 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 FRMD4BQ9Y2L6 1034 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 DCCP43146 1447 aa6.96□□□□□ -1.29
ZEB1-217ENST00000559858 CCDC162PA2VCL2 907 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 CAPN8A6NHC0 703 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 I3L4J1 428 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 GOLGA8RI6L899 631 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 FBP2O00757 339 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 ITM2AO43736 263 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 TBCAO75347 108 aaKnown RBP6.96□□□□□ -1.3
ZEB1-217ENST00000559858 FAM58BPP0C7Q3 252 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 RAG1P15918 1043 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 GAP43P17677 238 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 PPARGP37231 505 aaPredicted RBP6.96□□□□□ -1.3
ZEB1-217ENST00000559858 ALDH1A3P47895 512 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 CDK9P50750 372 aaKnown RBP6.96□□□□□ -1.3
ZEB1-217ENST00000559858 NOP14P78316 857 aaKnown RBP6.96□□□□□ -1.3
ZEB1-217ENST00000559858 BTKQ06187 659 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 MORF4L2Q15014 288 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 BCL2A1Q16548 175 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 CLEC16AQ2KHT3 1053 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 KLHL38Q2WGJ6 581 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 RABGAP1LQ5R372 815 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 POTEGQ6S5H5 508 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 CLEC4GQ6UXB4 293 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 NSMFQ6X4W1 530 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 RTKN2Q8IZC4 609 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 SCAIQ8N9R8 606 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 TTC17Q96AE7 1141 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 COA7Q96BR5 231 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 DCUN1D1Q96GG9 259 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 PHF12Q96QT6 1004 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 CCT7Q99832 543 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 HAUS8Q9BT25 410 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 RUSC1Q9BVN2 902 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 HEMGNQ9BXL5 484 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 ANO3Q9BYT9 981 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 DNAJC5Q9H3Z4 198 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 RIOX1Q9H6W3 641 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 SMYD3Q9H7B4 428 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 COQ6Q9Y2Z9 468 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 MYO3BQ8WXR4 1341 aa6.96□□□□□ -1.3
ZEB1-217ENST00000559858 TRPM3Q9HCF6 1732 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-217ENST00000559858 EIF3DO15371 548 aaKnown RBP eCLIP6.95□□□□□ -1.39e-7■■■■□ 23.8
ZEB1-217ENST00000559858 ADCY6O43306 1168 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 SGPL1O95470 568 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 TRIM49P0CI25 452 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 TRIM49CP0CI26 452 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms