RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 TXLNAP40222 546 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 CDR1P51861 262 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 TFAMQ00059 246 aaKnown RBP9.87□□□□□ -0.83
HDDC3-204ENST00000559834 MYL7Q01449 175 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 ZNF268Q14587 947 aaPredicted RBP9.87□□□□□ -0.83
HDDC3-204ENST00000559834 C8orf34Q49A92 452 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 AASDHQ4L235 1098 aaPredicted RBP9.87□□□□□ -0.83
HDDC3-204ENST00000559834 WDR44Q5JSH3 913 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 RRAGBQ5VZM2 374 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 TXNDC8Q6A555 127 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 SV2BQ7L1I2 683 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 DYMQ7RTS9 669 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 SFR1Q86XK3 245 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 TMEM86AQ8N2M4 240 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 CCDC26Q8TAB7 109 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 SPATA18Q8TC71 538 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 LRRC15Q8TF66 581 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 GAB3Q8WWW8 586 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 USP13Q92995 863 aaPredicted RBP9.87□□□□□ -0.83
HDDC3-204ENST00000559834 CHAMP1Q96JM3 812 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 ACCSQ96QU6 501 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 FAM213AQ9BRX8 229 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 PI4K2AQ9BTU6 479 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 EBF3Q9H4W6 596 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 ABCB6Q9NP58 842 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 MAGED2Q9UNF1 606 aaPredicted RBP9.87□□□□□ -0.83
HDDC3-204ENST00000559834 AGAP1Q9UPQ3 857 aa9.87□□□□□ -0.83
HDDC3-204ENST00000559834 TPRP12270 2363 aaKnown RBP9.86□□□□□ -0.83
HDDC3-204ENST00000559834 DCHS1Q96JQ0 3298 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 TISP43B9A030 160 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 AKAP3O75969 853 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 ZNF806P0C7X5 589 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 PDCP20941 246 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 GARTP22102 1010 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 ADSSP30520 456 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 LHX1P48742 406 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 GALK1P51570 392 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 LIMK1P53667 647 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 RBP5P82980 135 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 GRIN1Q05586 938 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 FAM160A1Q05DH4 1040 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 NR1H3Q13133 447 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 ALCAMQ13740 583 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 FSTL4Q6MZW2 842 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 CRELD2Q6UXH1 353 aaPredicted RBP9.86□□□□□ -0.83
HDDC3-204ENST00000559834 TMEM150AQ86TG1 271 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 EFCAB13Q8IY85 973 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 SYCP3Q8IZU3 236 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 PDCL2Q8N4E4 241 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 CPA6Q8N4T0 437 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 CSGALNACT2Q8N6G5 542 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 LRRC52Q8N7C0 313 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 FSIP1Q8NA03 581 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 LEO1Q8WVC0 666 aaPredicted RBP9.86□□□□□ -0.83
HDDC3-204ENST00000559834 EPSTI1Q96J88 318 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 MYRFLQ96LU7 910 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 P2RY13Q9BPV8 354 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 ARRDC1-AS1Q9H2J1 176 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 HPS4Q9NQG7 708 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 TMLHEQ9NVH6 421 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 C2orf42Q9NWW7 574 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 DDX43Q9NXZ2 648 aaKnown RBP9.86□□□□□ -0.83
HDDC3-204ENST00000559834 PCDHGA5Q9Y5G8 931 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 NCOR2Q9Y618 2525 aa9.86□□□□□ -0.83
HDDC3-204ENST00000559834 COL4A2P08572 1712 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 SPTBN2O15020 2390 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 TRAV19A0A0A6YYK7 116 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 KIAA0391O15091 583 aaKnown RBP9.85□□□□□ -0.83
HDDC3-204ENST00000559834 GDF9O60383 454 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 PPP1R37O75864 691 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 RHOBTB1O94844 696 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 GCNT3O95395 438 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 ITGB3P05106 788 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 KRT19P08727 400 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 USP17L7P0C7H9 530 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 CYP2F1P24903 491 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 PCSK1P29120 753 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 POLR2BP30876 1174 aaKnown RBP9.85□□□□□ -0.83
HDDC3-204ENST00000559834 RAP1GAPP47736 663 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 PXNP49023 591 aaPredicted RBP9.85□□□□□ -0.83
HDDC3-204ENST00000559834 PDE6CP51160 858 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 MYO1EQ12965 1108 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 DDR2Q16832 855 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 INTS6LQ5JSJ4 861 aaKnown RBP9.85□□□□□ -0.83
HDDC3-204ENST00000559834 L1TD1Q5T7N2 865 aaKnown RBP9.85□□□□□ -0.83
HDDC3-204ENST00000559834 TRIM68Q6AZZ1 485 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 DPH6Q7L8W6 267 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 SPATA2LQ8IUW3 424 aaPredicted RBP9.85□□□□□ -0.83
HDDC3-204ENST00000559834 BRSK2Q8IWQ3 736 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 TOP6BLQ8N6T0 577 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 OSCP1Q8WVF1 389 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 ATP2A3Q93084 1043 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 TRMT2BQ96GJ1 504 aaKnown RBP9.85□□□□□ -0.83
HDDC3-204ENST00000559834 ZC3H10Q96K80 434 aaKnown RBP9.85□□□□□ -0.83
HDDC3-204ENST00000559834 STRA6Q9BX79 667 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 TMEM206Q9H813 350 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 ECT2Q9H8V3 914 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 DUS2Q9NX74 493 aaKnown RBP9.85□□□□□ -0.83
HDDC3-204ENST00000559834 GDAP2Q9NXN4 497 aa9.85□□□□□ -0.83
HDDC3-204ENST00000559834 RBAKQ9NYW8 714 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 314.9 ms