RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 PCDHA11Q9Y5I1 949 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 A0A087X0T9 212 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.08□□□□□ -0.64
TPM1-221ENST00000559831 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.08□□□□□ -0.64
TPM1-221ENST00000559831 TMCO5BA8MYB1 307 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 H7C4K7 107 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 M0QYV0 167 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 C2CD2LO14523 706 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 MICAL2O94851 1124 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 ARHGEF15O94989 841 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 OAZ2O95190 189 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 CSPG5O95196 566 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 NDUFA10O95299 355 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 IPO7O95373 1038 aaKnown RBP11.08□□□□□ -0.64
TPM1-221ENST00000559831 SOD2P04179 222 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 CFHP08603 1231 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 OR4Q2P0C623 313 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 LINC00271P0C7V0 271 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 FAM228BP0C875 321 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 DNAJB2P25686 324 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 BMP8BP34820 402 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 BMPR1AP36894 532 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 GLUD2P49448 558 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 ARPP19P56211 112 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 CYP27A1Q02318 531 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 BMS1Q14692 1282 aaKnown RBP11.08□□□□□ -0.64
TPM1-221ENST00000559831 PSMD5Q16401 504 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 INTS6LQ5JSJ4 861 aaKnown RBP11.08□□□□□ -0.64
TPM1-221ENST00000559831 PPP1R26Q5T8A7 1209 aaPredicted RBP11.08□□□□□ -0.64
TPM1-221ENST00000559831 CHRDL2Q6WN34 429 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 TOGARAM2Q6ZUX3 1019 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 ANKS3Q6ZW76 656 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 SPRED2Q7Z698 418 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 DDX53Q86TM3 631 aaKnown RBP11.08□□□□□ -0.64
TPM1-221ENST00000559831 TDHQ8IZJ6 230 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 VPS52Q8N1B4 723 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 CRYBG2Q8N1P7 616 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 ACRBPQ8NEB7 543 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 CYFIP2Q96F07 1278 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 PCDHB18PQ96TA0 734 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 ACBD6Q9BR61 282 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 SYT11Q9BT88 431 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 NKX2-4Q9H2Z4 354 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 CRTAC1Q9NQ79 661 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 ADAMTS1Q9UHI8 967 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 KIAA1257Q9ULG3 409 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 PYCARDQ9ULZ3 195 aa11.08□□□□□ -0.64
TPM1-221ENST00000559831 EPN1Q9Y6I3 576 aaPredicted RBP11.08□□□□□ -0.64
TPM1-221ENST00000559831 MYBPHLA2RUH7 354 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 O00370 1275 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 DDX3XO00571 662 aaKnown RBP eCLIP11.07□□□□□ -0.642e-8■■■■□ 19.9
TPM1-221ENST00000559831 EFEMP2O95967 443 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 URODP06132 367 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 CPB1P15086 417 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 RPL17P18621 184 aaKnown RBP11.07□□□□□ -0.64
TPM1-221ENST00000559831 ANXA13P27216 316 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 STILQ15468 1287 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 SPA17Q15506 151 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 RAB30Q15771 203 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 CNGA2Q16280 664 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 SLC18A3Q16572 532 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 ASTE1Q2TB18 679 aaPredicted RBP11.07□□□□□ -0.64
TPM1-221ENST00000559831 SLC39A12Q504Y0 691 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 HS1BP3Q53T59 392 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 CCDC122Q5T0U0 273 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 NAA35Q5VZE5 725 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 ARHGAP17Q68EM7 881 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 DENND1BQ6P3S1 775 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 TRIM72Q6ZMU5 477 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 PALB2Q86YC2 1186 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 RNF168Q8IYW5 571 aaPredicted RBP11.07□□□□□ -0.64
TPM1-221ENST00000559831 DCP1BQ8IZD4 617 aaKnown RBP11.07□□□□□ -0.64
TPM1-221ENST00000559831 OLIG1Q8TAK6 271 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 UBA3Q8TBC4 463 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 SLC2A14Q8TDB8 520 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 AUTS2Q8WXX7 1259 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 MYLPFQ96A32 169 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 PLVAPQ9BX97 442 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 B3GNT5Q9BYG0 378 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 PBX4Q9BYU1 374 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 ZCWPW1Q9H0M4 648 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 HESX1Q9UBX0 185 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 GTF3C4Q9UKN8 822 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 TSPAN16Q9UKR8 245 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.07□□□□□ -0.64
TPM1-221ENST00000559831 CEP83Q9Y592 693 aa11.07□□□□□ -0.64
TPM1-221ENST00000559831 ATG2AQ2TAZ0 1938 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 OR6C75A6NL08 312 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 EIF3CLB5ME19 914 aaKnown RBP11.06□□□□□ -0.64
TPM1-221ENST00000559831 CLDN5O00501 218 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 PLCB3Q01970 1234 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 DSG1Q02413 1049 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 TAP1Q03518 808 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 MRPL58Q14197 206 aaKnown RBP11.06□□□□□ -0.64
TPM1-221ENST00000559831 CLEC16AQ2KHT3 1053 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 PPP2R2DQ66LE6 453 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 ALKBH5Q6P6C2 394 aaKnown RBP11.06□□□□□ -0.64
TPM1-221ENST00000559831 LCLAT1Q6UWP7 414 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 KIAA1328Q86T90 577 aa11.06□□□□□ -0.64
TPM1-221ENST00000559831 LRRTM3Q86VH5 581 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms