RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 PTPN20Q4JDL3 420 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 RHBDF2Q6PJF5 856 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 SPOCD1Q6ZMY3 1216 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 IPO4Q8TEX9 1081 aaKnown RBP11.91□□□□□ -0.5
CLPX-204ENST00000559152 SMYD3Q9H7B4 428 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 RSPH14Q9UHP6 348 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLPX-204ENST00000559152 NEU2Q9Y3R4 380 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 ZSWIM8A7E2V4 1837 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 MCM3APO60318 1980 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 O00370 1275 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 NDUFAB1O14561 156 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 RGS16O15492 202 aaPredicted RBP11.9□□□□□ -0.5
CLPX-204ENST00000559152 CSDE1O75534 798 aaKnown RBP11.9□□□□□ -0.5
CLPX-204ENST00000559152 GJB6O95452 261 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 ATF7P17544 494 aaPredicted RBP11.9□□□□□ -0.5
CLPX-204ENST00000559152 IVDP26440 423 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 ATP5DP30049 168 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 GABRB2P47870 512 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 YARSP54577 528 aaKnown RBP11.9□□□□□ -0.5
CLPX-204ENST00000559152 SNX16P57768 344 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 GUCY1A3Q02108 690 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 ZNF252P-AS1Q0IIN9 211 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 CYP4A22Q5TCH4 519 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 DAB2IPQ5VWQ8 1189 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 B4GALNT4Q76KP1 1039 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 TTC13Q8NBP0 860 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 KIF12Q96FN5 646 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 HEXIM2Q96MH2 286 aaKnown RBP11.9□□□□□ -0.5
CLPX-204ENST00000559152 TSPAN18Q96SJ8 248 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 PPP1R16BQ96T49 567 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 HERPUD2Q9BSE4 406 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 DNAI2Q9GZS0 605 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 SDCBP2Q9H190 292 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 R3HDM2Q9Y2K5 976 aaKnown RBP11.9□□□□□ -0.5
CLPX-204ENST00000559152 PLXNA1Q9UIW2 1896 aa11.9□□□□□ -0.5
CLPX-204ENST00000559152 SMIM35A0A1B0GVV1 85 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 DCAF8L1A6NGE4 600 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 A6NJR5 290 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 LIASO43766 372 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 MICAL2O94851 1124 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 RDXP35241 583 aaKnown RBP11.9□□□□□ -0.51
CLPX-204ENST00000559152 RFC1P35251 1148 aaPredicted RBP11.9□□□□□ -0.51
CLPX-204ENST00000559152 ITGA8P53708 1063 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 OGDHQ02218 1023 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 PTGISQ16647 500 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 NOTUMQ6P988 496 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 SLC27A1Q6PCB7 646 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 CCDC25Q86WR0 208 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 XYLT1Q86Y38 959 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 RELL1Q8IUW5 271 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 NT5C1AQ9BXI3 368 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 ELOVL4Q9GZR5 314 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 SLC12A6Q9UHW9 1150 aa11.9□□□□□ -0.51
CLPX-204ENST00000559152 hCG_1818297A0A087WSY0 165 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 LRRD1A4D1F6 860 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 GOLGA8SH3BPF8 625 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 M0QYV0 167 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 RASGRF2O14827 1237 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 MEFVO15553 781 aaPredicted RBP11.89□□□□□ -0.51
CLPX-204ENST00000559152 CAND2O75155 1236 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 RNF8O76064 485 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 SHBGP04278 402 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 FGFR4P22455 802 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 AXLP30530 894 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 TTC19Q6DKK2 380 aaPredicted RBP11.89□□□□□ -0.51
CLPX-204ENST00000559152 MFSD7Q6UXD7 560 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 TAOK1Q7L7X3 1001 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 CENPTQ96BT3 561 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 ADAMTS10Q9H324 1103 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 ASNSD1Q9NWL6 643 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 ZNF148Q9UQR1 794 aa11.89□□□□□ -0.51
CLPX-204ENST00000559152 F2P00734 622 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 ITGAVP06756 1048 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 KLRC2P26717 231 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 CDKN2BP42772 138 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 GPD2P43304 727 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 KCTD19Q17RG1 926 aaPredicted RBP11.88□□□□□ -0.51
CLPX-204ENST00000559152 KAZNQ674X7 775 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 MFSD5Q6N075 450 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 LCLAT1Q6UWP7 414 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 CATSPER4Q7RTX7 472 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 LRRC52Q8N7C0 313 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 BEST2Q8NFU1 509 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 NKD2Q969F2 451 aaPredicted RBP11.88□□□□□ -0.51
CLPX-204ENST00000559152 MCRS1Q96EZ8 462 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 SERPINB12Q96P63 405 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 CPXM1Q96SM3 734 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 CCDC77Q9BR77 488 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 CDC42EP4Q9H3Q1 356 aaKnown RBP11.88□□□□□ -0.51
CLPX-204ENST00000559152 SETD4Q9NVD3 440 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 TLDC2A0PJX2 215 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 PI4K2BG5E9Z4 385 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 TP73O15350 636 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 DYNC1LI2O43237 492 aaPredicted RBP11.88□□□□□ -0.51
CLPX-204ENST00000559152 CELF2O95319 508 aaKnown RBP11.88□□□□□ -0.51
CLPX-204ENST00000559152 TTC4O95801 387 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 KRT10P13645 584 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 DESP17661 470 aa11.88□□□□□ -0.51
CLPX-204ENST00000559152 CCT5P48643 541 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms