RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 GLUD1P00367 558 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 CCDC130P13994 396 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 ATF6P18850 670 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 GNL1P36915 607 aaPredicted RBP11.63□□□□□ -0.55
TPM1-217ENST00000559108 ZNF132P52740 706 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 FANCCQ00597 558 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 ADCY1Q08828 1119 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 DUSP4Q13115 394 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 SYCP1Q15431 976 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 EXOC3L4Q17RC7 722 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 ZNF394Q53GI3 561 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 MDH1BQ5I0G3 518 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 ANKRD54Q6NXT1 300 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 PDXDC1Q6P996 788 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 POTEHQ6S545 545 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 GBP6Q6ZN66 633 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 METTL23Q86XA0 190 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 GPIHBP1Q8IV16 184 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 FUKQ8N0W3 1084 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 PPM1KQ8N3J5 372 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 SLC4A11Q8NBS3 891 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 KREMEN2Q8NCW0 462 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 ZNF461Q8TAF7 563 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 SLC7A14Q8TBB6 771 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 SPATA18Q8TC71 538 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 PCED1BQ96HM7 432 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 CDCA3Q99618 268 aaPredicted RBP11.63□□□□□ -0.55
TPM1-217ENST00000559108 LSM14BQ9BX40 385 aaKnown RBP11.63□□□□□ -0.55
TPM1-217ENST00000559108 NAA15Q9BXJ9 866 aaKnown RBP11.63□□□□□ -0.55
TPM1-217ENST00000559108 B3GNT5Q9BYG0 378 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 ZNF518BQ9C0D4 1074 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 UBE2ZQ9H832 354 aaPredicted RBP11.63□□□□□ -0.55
TPM1-217ENST00000559108 CYP3A43Q9HB55 503 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
TPM1-217ENST00000559108 TCF20Q9UGU0 1960 aaKnown RBP11.63□□□□□ -0.55
TPM1-217ENST00000559108 C5orf42Q9H799 3197 aa11.63□□□□□ -0.55
TPM1-217ENST00000559108 C8AP07357 584 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 ATF2P15336 505 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 PTPN1P18031 435 aaKnown RBP11.62□□□□□ -0.55
TPM1-217ENST00000559108 KCNA5P22460 613 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 CYP2F1P24903 491 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 PBX1P40424 430 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 LHX1P48742 406 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 NTHL1P78549 312 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 CREMQ03060 361 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 NR1I3Q14994 352 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 WDR44Q5JSH3 913 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 SDHAF4Q5VUM1 108 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 CRYBG2Q8N1P7 616 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 B3GALNT2Q8NCR0 500 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 MYCBPAPQ8TBZ2 947 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 GPR152Q8TDT2 470 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 TFAP2BQ92481 460 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 ERGIC2Q96RQ1 377 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 IMPG2Q9BZV3 1241 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 SNX25Q9H3E2 840 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 UBE2TQ9NPD8 197 aaPredicted RBP11.62□□□□□ -0.55
TPM1-217ENST00000559108 FAM49BQ9NUQ9 324 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 HCFC1R1Q9NWW0 138 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 ABI2Q9NYB9 513 aaPredicted RBP11.62□□□□□ -0.55
TPM1-217ENST00000559108 CEP72Q9P209 647 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 APEX2Q9UBZ4 518 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 AFF4Q9UHB7 1163 aaKnown RBP11.62□□□□□ -0.55
TPM1-217ENST00000559108 CDH9Q9ULB4 789 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 CNTN6Q9UQ52 1028 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 R3HCC1Q9Y3T6 440 aaKnown RBP11.62□□□□□ -0.55
TPM1-217ENST00000559108 YIPF1Q9Y548 306 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 INSL5Q9Y5Q6 135 aa11.62□□□□□ -0.55
TPM1-217ENST00000559108 ARHGEF37A1IGU5 675 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 PES1O00541 588 aaKnown RBP11.61□□□□□ -0.55
TPM1-217ENST00000559108 CCL16O15467 120 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 ZMYND10O75800 440 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 BEST1O76090 585 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 CAVIN2O95810 425 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 CFHP08603 1231 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 FAM163BP0C2L3 166 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 CDK11BP21127 795 aaKnown RBP11.61□□□□□ -0.55
TPM1-217ENST00000559108 SSTR3P32745 418 aaPredicted RBP11.61□□□□□ -0.55
TPM1-217ENST00000559108 KCNQ1P51787 676 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 GCNT1Q02742 428 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 UBXN1Q04323 297 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 SKIV2LQ15477 1246 aaKnown RBP11.61□□□□□ -0.55
TPM1-217ENST00000559108 ARHGAP44Q17R89 818 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 RARS2Q5T160 578 aaKnown RBP11.61□□□□□ -0.55
TPM1-217ENST00000559108 KLHDC7AQ5VTJ3 777 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 TPGS2Q68CL5 300 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 TMC5Q6UXY8 1006 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 EP400NLQ6ZTU2 488 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 TCEAL8Q8IYN2 117 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 THEM5Q8N1Q8 247 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 ZMIZ2Q8NF64 920 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.61□□□□□ -0.55
TPM1-217ENST00000559108 OLIG1Q8TAK6 271 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 SHC3Q92529 594 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 CYP4F11Q9HBI6 524 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 IFNKQ9P0W0 207 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 DNAJC12Q9UKB3 198 aa11.61□□□□□ -0.55
TPM1-217ENST00000559108 HAPLN1P10915 354 aaPredicted RBP11.6□□□□□ -0.55
TPM1-217ENST00000559108 UCHL3P15374 230 aa11.6□□□□□ -0.55
TPM1-217ENST00000559108 BDNFP23560 247 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms