RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 MRPL58Q14197 206 aaKnown RBP6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 POSTNQ15063 836 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 TRIP4Q15650 581 aaPredicted RBP6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 PDXDC1Q6P996 788 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 C15orf39Q6ZRI6 1047 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 UNC13DQ70J99 1090 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 BRSK2Q8IWQ3 736 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 CD302Q8IX05 232 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 EFCAB13Q8IY85 973 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 KREMEN2Q8NCW0 462 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 CMASQ8NFW8 434 aaPredicted RBP6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 HDAC7Q8WUI4 952 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 ZNF707Q96C28 371 aaPredicted RBP6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 RIPOR3Q96MK2 946 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 NECTIN4Q96NY8 510 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 TSPAN18Q96SJ8 248 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 PYM1Q9BRP8 204 aaKnown RBP6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 CBWD1Q9BRT8 395 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 PLEKHA4Q9H4M7 779 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 ASB7Q9H672 318 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 C11orf16Q9NQ32 467 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 MUTYHQ9UIF7 546 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 FBXW11Q9UKB1 542 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 NUB1Q9Y5A7 615 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 ATP6V1DQ9Y5K8 247 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 BACE2Q9Y5Z0 518 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 CDY1Q9Y6F8 540 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 CCDC195A0A1B0GUA6 201 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 PVALEFA0A1B0GWK0 134 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 ANO9A1A5B4 782 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 GOLGA8IPA6NC78 632 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 GOLGA8JA6NMD2 632 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 SOBPA7XYQ1 873 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 C2CD4DB7Z1M9 353 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 M0QZQ0 153 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 EIF1AYO14602 144 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 SYN3O14994 580 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 EIF3DO15371 548 aaKnown RBP eCLIP6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 XPOTO43592 962 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 DCXO43602 365 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 GFRA3O60609 400 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 GRNP28799 593 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 MCM4P33991 863 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 AARSP49588 968 aaKnown RBP eCLIP6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 SMCPP49901 116 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 NDUFA8P51970 172 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 POU5F1Q01860 360 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 RAB33AQ14088 237 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 TMEM132DQ14C87 1099 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 ATAT1Q5SQI0 421 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 ARMCX5Q6P1M9 558 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 ANKS3Q6ZW76 656 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 CEP57L1Q8IYX8 460 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 SYCP3Q8IZU3 236 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 BEST2Q8NFU1 509 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 ZNF507Q8TCN5 953 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 PAGE5Q96GU1 130 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 FAM84AQ96KN4 292 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 CEP63Q96MT8 703 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 FAM213AQ9BRX8 229 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 RHOBTB2Q9BYZ6 727 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 SCAND2PQ9GZW5 306 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 GOLPH3LQ9H4A5 285 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 PCIF1Q9H4Z3 704 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 TMEM206Q9H813 350 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 DPP7Q9UHL4 492 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 FOXD3Q9UJU5 478 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 DERAQ9Y315 318 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 C2CD2Q9Y426 696 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 MUC6Q6W4X9 2439 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 NOTCH4Q99466 2003 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 A0A1W2PQ27 194 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 A0A1W2PQ64 194 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 A0A1W2PQD8 194 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 WDR27A2RRH5 827 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 FAM86C2PA6NEL3 165 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 ST8SIA5O15466 376 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 TGFB1I1O43294 461 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 N4BP1O75113 896 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 IL18RAPO95256 599 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 C8AP07357 584 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 ROR1Q01973 937 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 TYRO3Q06418 890 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 BMT2Q1RMZ1 405 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 C9orf57Q5W0N0 161 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 SCARA3Q6AZY7 606 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 SLC8B1Q6J4K2 584 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 ELMSAN1Q6PJG2 1045 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 STXBP4Q6ZWJ1 553 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 NELFCDQ8IXH7 590 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 FSIP1Q8NA03 581 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 SCFD1Q8WVM8 642 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 SMG7Q92540 1137 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 SLC39A2Q9NP94 309 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 AGPAT3Q9NRZ7 376 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 ZDHHC7Q9NXF8 308 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 RBAKQ9NYW8 714 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 FBXL5Q9UKA1 691 aa6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 TIMM13Q9Y5L4 95 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-204ENST00000558966 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms