RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 CCDC142Q17RM4 750 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 CT47A1Q5JQC4 288 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-205ENST00000558428 WDR44Q5JSH3 913 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 TRIM59Q8IWR1 403 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 ZNF512Q96ME7 567 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-205ENST00000558428 PKMYT1Q99640 499 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 NIF3L1Q9GZT8 377 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 SDCBP2Q9H190 292 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 ANO10Q9NW15 660 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 HCFC1R1Q9NWW0 138 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 DNMT3BQ9UBC3 853 aaKnown RBP13.2□□□□□ -0.3
SMAD3-205ENST00000558428 HSFX1Q9UBD0 423 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 NME7Q9Y5B8 376 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMAD3-205ENST00000558428 C2CD4DB7Z1M9 353 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 LOC730098B7Z3J9 87 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 HAPLN1P10915 354 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-205ENST00000558428 PTPN2P17706 415 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 FSHRP23945 695 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 EPHB3P54753 998 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 CETN1Q12798 172 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 KCNH2Q12809 1159 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 MAPRE1Q15691 268 aaKnown RBP13.19□□□□□ -0.3
SMAD3-205ENST00000558428 STX1AQ16623 288 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 PABPC1LQ4VXU2 614 aaKnown RBP13.19□□□□□ -0.3
SMAD3-205ENST00000558428 MDH1BQ5I0G3 518 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 IQCEQ6IPM2 695 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 FAM171BQ6P995 826 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 C4orf50Q6ZRC1 276 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 GET4Q7L5D6 327 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-205ENST00000558428 SPATA2LQ8IUW3 424 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-205ENST00000558428 TDRD5Q8NAT2 981 aaKnown RBP13.19□□□□□ -0.3
SMAD3-205ENST00000558428 MYLPFQ96A32 169 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 ACSF2Q96CM8 615 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-205ENST00000558428 CORO1BQ9BR76 489 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 BCO2Q9BYV7 579 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 DPEP3Q9H4B8 488 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 THAP9Q9H5L6 903 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 CD320Q9NPF0 282 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 CRTAC1Q9NQ79 661 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 CEP72Q9P209 647 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 USTQ9Y2C2 406 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 COQ4Q9Y3A0 265 aa13.19□□□□□ -0.3
SMAD3-205ENST00000558428 AFPP02771 609 aaKnown RBP13.18□□□□□ -0.3
SMAD3-205ENST00000558428 RHOP08100 348 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 PTPN1P18031 435 aaKnown RBP13.18□□□□□ -0.3
SMAD3-205ENST00000558428 GBP2P32456 591 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-205ENST00000558428 MTIF2P46199 727 aaKnown RBP13.18□□□□□ -0.3
SMAD3-205ENST00000558428 NDST1P52848 882 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 CYP27A1Q02318 531 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 VEPH1Q14D04 833 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 KLHL40Q2TBA0 621 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 C11orf57Q6ZUT1 292 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-205ENST00000558428 OTOP3Q7RTS5 596 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 IRF2BP1Q8IU81 584 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 FAM114A1Q8IWE2 563 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 B3GALNT2Q8NCR0 500 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 FAM200AQ8TCP9 573 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 FUBP3Q96I24 572 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMAD3-205ENST00000558428 TNIP3Q96KP6 325 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 LPIN3Q9BQK8 851 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 DNAJC25Q9H1X3 360 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 CYP3A43Q9HB55 503 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 ABCB6Q9NP58 842 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 MAGEC2Q9UBF1 373 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-205ENST00000558428 BDP1A6H8Y1 2624 aa13.18□□□□□ -0.3
SMAD3-205ENST00000558428 TNFRSF10AO00220 468 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 DLL1O00548 723 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 PMM2O15305 246 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 P4HA2O15460 535 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 ATF6P18850 670 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 CD58P19256 250 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 CYP2F1P24903 491 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 GPR15P49685 360 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 LRMPQ12912 555 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 ORC1Q13415 861 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 CFAP221Q4G0U5 840 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 HSP90AA4PQ58FG1 418 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 CYP4A22Q5TCH4 519 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 PDZD4Q76G19 769 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-205ENST00000558428 ITIH5Q86UX2 942 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 UNC93AQ86WB7 457 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 SCN4BQ8IWT1 228 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 HS6ST3Q8IZP7 471 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 PLCD3Q8N3E9 789 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 ITFG1Q8TB96 612 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 MYCBPAPQ8TBZ2 947 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 GIPC2Q8TF65 315 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 TATDN2Q93075 761 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 PCED1BQ96HM7 432 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 FAXDC2Q96IV6 333 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 MYADMQ96S97 322 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 ASAH2Q9NR71 780 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMAD3-205ENST00000558428 HMGXB4Q9UGU5 601 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 MRPS23Q9Y3D9 190 aaKnown RBP13.17□□□□□ -0.3
SMAD3-205ENST00000558428 NFE2L3Q9Y4A8 694 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 ASB3Q9Y575 518 aa13.17□□□□□ -0.3
SMAD3-205ENST00000558428 GREB1Q4ZG55 1949 aa13.16□□□□□ -0.3
SMAD3-205ENST00000558428 ZNF197O14709 1029 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms