RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 STXBP5LQ9Y2K9 1186 aa7.88□□□□□ -1.15
SPG11-204ENST00000557866 NOC2LQ9Y3T9 749 aaKnown RBP7.88□□□□□ -1.15
SPG11-204ENST00000557866 HES2Q9Y543 173 aa7.88□□□□□ -1.15
SPG11-204ENST00000557866 PCDHB4Q9Y5E5 795 aa7.88□□□□□ -1.15
SPG11-204ENST00000557866 SAR1BQ9Y6B6 198 aa7.88□□□□□ -1.15
SPG11-204ENST00000557866 USP3Q9Y6I4 520 aa7.88□□□□□ -1.15
SPG11-204ENST00000557866 HTTP42858 3142 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 ANKRD62A6NC57 917 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 EFCAB8A8MWE9 144 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 RTN2O75298 545 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 RECQL4O94761 1208 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 IGHA1P01876 353 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 CHRNA1P02708 482 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 HMGCRP04035 888 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 CYP1A1P04798 512 aaPredicted RBP7.87□□□□□ -1.15
SPG11-204ENST00000557866 ITGB3P05106 788 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 CYP1A2P05177 515 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 ASGR1P07306 291 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 WEE2P0C1S8 567 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 UNGP13051 313 aaPredicted RBP7.87□□□□□ -1.15
SPG11-204ENST00000557866 PRLRP16471 622 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 ABCB4P21439 1286 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 HOXD10P28358 340 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 AXLP30530 894 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 NOP2P46087 812 aaKnown RBP7.87□□□□□ -1.15
SPG11-204ENST00000557866 RAP1GAPP47736 663 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 PDE6CP51160 858 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 CDH8P55286 799 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 MRPS6P82932 125 aaKnown RBP7.87□□□□□ -1.15
SPG11-204ENST00000557866 TMEM132DQ14C87 1099 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 TCEAL1Q15170 157 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 PCBP1Q15365 356 aaKnown RBP eCLIP7.87□□□□□ -1.15
SPG11-204ENST00000557866 ZBTB6Q15916 424 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 MEI1Q5TIA1 1274 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 ACAD10Q6JQN1 1059 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 SLC27A1Q6PCB7 646 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 TMEM270Q6UE05 265 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 SCARA5Q6ZMJ2 495 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 RPAINQ86UA6 219 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 SERINC5Q86VE9 423 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 CREG2Q8IUH2 290 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 MNS1Q8NEH6 495 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 SLC35G2Q8TBE7 412 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 RFFLQ8WZ73 363 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 SNX27Q96L92 541 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 OSBPL9Q96SU4 736 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 ADPGKQ9BRR6 497 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 CCDC94Q9BW85 323 aaPredicted RBP7.87□□□□□ -1.15
SPG11-204ENST00000557866 CELF4Q9BZC1 486 aaKnown RBP7.87□□□□□ -1.15
SPG11-204ENST00000557866 EPC1Q9H2F5 836 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 NXF3Q9H4D5 531 aaKnown RBP7.87□□□□□ -1.15
SPG11-204ENST00000557866 SMYD3Q9H7B4 428 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 VRTNQ9H8Y1 702 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 PLEKHA5Q9HAU0 1116 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 CISHQ9NSE2 258 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 RNF19AQ9NV58 838 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 CHORDC1Q9UHD1 332 aaPredicted RBP7.87□□□□□ -1.15
SPG11-204ENST00000557866 DDX20Q9UHI6 824 aaKnown RBP7.87□□□□□ -1.15
SPG11-204ENST00000557866 PACSIN2Q9UNF0 486 aaPredicted RBP7.87□□□□□ -1.15
SPG11-204ENST00000557866 C2CD2Q9Y426 696 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 PCDHB2Q9Y5E7 798 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 CDY2AQ9Y6F7 541 aa7.87□□□□□ -1.15
SPG11-204ENST00000557866 PPEF2O14830 753 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 BUB1BO60566 1050 aaPredicted RBP7.86□□□□□ -1.15
SPG11-204ENST00000557866 FKTNO75072 461 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 MTA2O94776 668 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 KRT19P08727 400 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 ZSCAN20P17040 1043 aaPredicted RBP7.86□□□□□ -1.15
SPG11-204ENST00000557866 CD58P19256 250 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 AKAP5P24588 427 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 GNA15P30679 374 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 POLR2BP30876 1174 aaKnown RBP7.86□□□□□ -1.15
SPG11-204ENST00000557866 CXCR5P32302 372 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 NOS2P35228 1153 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 BPIFB4P59827 614 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 GPC5P78333 572 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 TNP2Q05952 138 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 PTPROQ16827 1216 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 TRIM71Q2Q1W2 868 aaKnown RBP7.86□□□□□ -1.15
SPG11-204ENST00000557866 XKR4Q5GH76 650 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 FAM47CQ5HY64 1035 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 NAA35Q5VZE5 725 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 C1orf229Q6ZS94 237 aaPredicted RBP7.86□□□□□ -1.15
SPG11-204ENST00000557866 NT5DC3Q86UY8 548 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 ZNF677Q86XU0 584 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 CD302Q8IX05 232 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 CEP112Q8N8E3 955 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 NOA1Q8NC60 698 aaKnown RBP7.86□□□□□ -1.15
SPG11-204ENST00000557866 ARRDC4Q8NCT1 418 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 SMG8Q8ND04 991 aaKnown RBP7.86□□□□□ -1.15
SPG11-204ENST00000557866 RAET1EQ8TD07 263 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 ZNF296Q8WUU4 475 aaPredicted RBP7.86□□□□□ -1.15
SPG11-204ENST00000557866 CPA5Q8WXQ8 436 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 CTNNBL1Q8WYA6 563 aaPredicted RBP7.86□□□□□ -1.15
SPG11-204ENST00000557866 TFAP2BQ92481 460 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 TAF4BQ92750 862 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 C18orf25Q96B23 403 aaPredicted RBP7.86□□□□□ -1.15
SPG11-204ENST00000557866 CYFIP2Q96F07 1278 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 CAPZA3Q96KX2 299 aa7.86□□□□□ -1.15
SPG11-204ENST00000557866 UCN2Q96RP3 112 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms