RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-211ENST00000557726 FAM173BQ6P4H8 233 aa13.75□□□□□ -0.21
RDH11-211ENST00000557726 CEP68Q76N32 757 aa13.75□□□□□ -0.21
RDH11-211ENST00000557726 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.75□□□□□ -0.21
RDH11-211ENST00000557726 LONP2Q86WA8 852 aa13.75□□□□□ -0.21
RDH11-211ENST00000557726 SYNPOQ8N3V7 929 aa13.75□□□□□ -0.21
RDH11-211ENST00000557726 PDCL2Q8N4E4 241 aa13.75□□□□□ -0.21
RDH11-211ENST00000557726 CSGALNACT2Q8N6G5 542 aa13.75□□□□□ -0.21
RDH11-211ENST00000557726 ZSWIM2Q8NEG5 633 aa13.75□□□□□ -0.21
RDH11-211ENST00000557726 MRPS31Q92665 395 aaKnown RBP13.75□□□□□ -0.21
RDH11-211ENST00000557726 STRA6Q9BX79 667 aa13.75□□□□□ -0.21
RDH11-211ENST00000557726 PARD6AQ9NPB6 346 aa13.75□□□□□ -0.21
RDH11-211ENST00000557726 PANK4Q9NVE7 773 aa13.75□□□□□ -0.21
RDH11-211ENST00000557726 TMLHEQ9NVH6 421 aa13.75□□□□□ -0.21
RDH11-211ENST00000557726 OBSL1O75147 1896 aa13.75□□□□□ -0.21
RDH11-211ENST00000557726 SDK1Q7Z5N4 2213 aa13.75□□□□□ -0.21
RDH11-211ENST00000557726 DCHS1Q96JQ0 3298 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 HRO43593 1189 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 F11P03951 625 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 RETP07949 1114 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 TMEM191BP0C7N4 346 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 HMGA1P17096 107 aaKnown RBP13.74□□□□□ -0.21
RDH11-211ENST00000557726 SYT1P21579 422 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 ACAT1P24752 427 aaKnown RBP13.74□□□□□ -0.21
RDH11-211ENST00000557726 DDX6P26196 483 aaKnown RBP eCLIP13.74□□□□□ -0.21
RDH11-211ENST00000557726 CNR2P34972 360 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 GPR15P49685 360 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 WNT7BP56706 349 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 NLRP12P59046 1061 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 RPL10AP62906 217 aaKnown RBP13.74□□□□□ -0.21
RDH11-211ENST00000557726 RESTQ13127 1097 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 SRSF5Q13243 272 aaKnown RBP13.74□□□□□ -0.21
RDH11-211ENST00000557726 ALCAMQ13740 583 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 WDR44Q5JSH3 913 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 SDHAF4Q5VUM1 108 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 TXNDC8Q6A555 127 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 CC2D1AQ6P1N0 951 aaPredicted RBP13.74□□□□□ -0.21
RDH11-211ENST00000557726 C1orf127Q8N9H9 656 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 STKLD1Q8NE28 680 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 TTC16Q8NEE8 873 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 ACBD6Q9BR61 282 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 EBF3Q9H4W6 596 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 PCIF1Q9H4Z3 704 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 OLFML3Q9NRN5 406 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 TDP1Q9NUW8 608 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 DDX43Q9NXZ2 648 aaKnown RBP13.74□□□□□ -0.21
RDH11-211ENST00000557726 ITGA11Q9UKX5 1188 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 L1RE1Q9UN81 338 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 SPAG17Q6Q759 2223 aa13.74□□□□□ -0.21
RDH11-211ENST00000557726 K7ESF4 209 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 EXTL3O43909 919 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 PAPSS2O95340 614 aaPredicted RBP13.73□□□□□ -0.21
RDH11-211ENST00000557726 TGM1P22735 817 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 CYP2F1P24903 491 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 CASP5P51878 434 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 RBP5P82980 135 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 GRSF1Q12849 480 aaKnown RBP eCLIP13.73□□□□□ -0.21
RDH11-211ENST00000557726 RUNX3Q13761 415 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 CCINQ13939 588 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 DDR2Q16832 855 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 INTS6LQ5JSJ4 861 aaKnown RBP13.73□□□□□ -0.21
RDH11-211ENST00000557726 TRIM68Q6AZZ1 485 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 TMEM150AQ86TG1 271 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 CCDC65Q8IXS2 484 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 TMEM86AQ8N2M4 240 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 LRRC52Q8N7C0 313 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 PDILTQ8N807 584 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 USP13Q92995 863 aaPredicted RBP13.73□□□□□ -0.21
RDH11-211ENST00000557726 ANKRD36BP1Q96IX9 119 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 FAM83CQ9BQN1 747 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 CBWD1Q9BRT8 395 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 RTKNQ9BST9 563 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 TMEM206Q9H813 350 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 KIF9Q9HAQ2 790 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 PDE11AQ9HCR9 933 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 TRPC7Q9HCX4 862 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 C2orf42Q9NWW7 574 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 UXTQ9UBK9 157 aaPredicted RBP13.73□□□□□ -0.21
RDH11-211ENST00000557726 CCL26Q9Y258 94 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 SNX9Q9Y5X1 595 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.73□□□□□ -0.21
RDH11-211ENST00000557726 SPTBN2O15020 2390 aa13.73□□□□□ -0.21
RDH11-211ENST00000557726 DMXL1Q9Y485 3027 aa13.72□□□□□ -0.21
RDH11-211ENST00000557726 DCDC2BA2VCK2 349 aa13.72□□□□□ -0.21
RDH11-211ENST00000557726 LRP3O75074 770 aa13.72□□□□□ -0.21
RDH11-211ENST00000557726 PRPF6O94906 941 aaKnown RBP13.72□□□□□ -0.21
RDH11-211ENST00000557726 PCSK1P29120 753 aa13.72□□□□□ -0.21
RDH11-211ENST00000557726 AMPD2Q01433 879 aa13.72□□□□□ -0.21
RDH11-211ENST00000557726 MYO1EQ12965 1108 aa13.72□□□□□ -0.21
RDH11-211ENST00000557726 LMBRD2Q68DH5 695 aaPredicted RBP13.72□□□□□ -0.21
RDH11-211ENST00000557726 STXBP4Q6ZWJ1 553 aa13.72□□□□□ -0.21
RDH11-211ENST00000557726 MON1AQ86VX9 555 aa13.72□□□□□ -0.21
RDH11-211ENST00000557726 SPATA2LQ8IUW3 424 aaPredicted RBP13.72□□□□□ -0.21
RDH11-211ENST00000557726 SCN4BQ8IWT1 228 aa13.72□□□□□ -0.21
RDH11-211ENST00000557726 ADGRF2Q8IZF7 708 aa13.72□□□□□ -0.21
RDH11-211ENST00000557726 GPD1LQ8N335 351 aa13.72□□□□□ -0.21
RDH11-211ENST00000557726 LEO1Q8WVC0 666 aaPredicted RBP13.72□□□□□ -0.21
RDH11-211ENST00000557726 FAM84AQ96KN4 292 aa13.72□□□□□ -0.21
RDH11-211ENST00000557726 MTMR12Q9C0I1 747 aa13.72□□□□□ -0.21
RDH11-211ENST00000557726 ABCB6Q9NP58 842 aa13.72□□□□□ -0.21
RDH11-211ENST00000557726 HPS4Q9NQG7 708 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms