RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 DNAJC6O75061 913 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 ATP9AO75110 1047 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 SKIP12755 728 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 TBXAS1P24557 533 aaPredicted RBP12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 SSTR1P30872 391 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 LIG4P49917 911 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 GHRHRQ02643 423 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 ZBTB16Q05516 673 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 EFTUD2Q15029 972 aaKnown RBP eCLIP12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 RCN1Q15293 331 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 SNX30Q5VWJ9 437 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 DSTYKQ6XUX3 929 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 VPS52Q8N1B4 723 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 ZNF276Q8N554 614 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 SYTL5Q8TDW5 730 aaPredicted RBP12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 DHRS4Q9BTZ2 278 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 NUMBLQ9Y6R0 609 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 COL11A2P13942 1736 aaPredicted RBP12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 SPDYE5A6NIY4 337 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 H0YCG3 227 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 UPP2O95045 317 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 VNN1O95497 513 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 CALB1P05937 261 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 MMP8P22894 467 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 OCRLQ01968 901 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 DNAJC24Q6P3W2 148 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 DCUN1D2Q6PH85 259 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 SLC30A9Q6PML9 568 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 C3orf62Q6ZUJ4 267 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 MCPH1Q8NEM0 835 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 RDM1Q8NG50 284 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 FAM136AQ96C01 138 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 APOBEC3GQ9HC16 384 aaKnown RBP12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 SLC17A7Q9P2U7 560 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 SNCAIPQ9Y6H5 919 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 WDR81Q562E7 1941 aa12.42□□□□□ -0.42
VIPAS39-211ENST00000557658 TGDSO95455 350 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 ABCD1P33897 745 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 CDKN2BP42772 138 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 TUBP50607 506 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 RTP1P59025 263 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 CDK16Q00536 496 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 SLC34A1Q06495 639 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 PGM5Q15124 567 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 CCDC62Q6P9F0 684 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 RHPN2Q8IUC4 686 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 PALM2Q8IXS6 379 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 PPFIBP2Q8ND30 876 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 SLC35B2Q8TB61 432 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 MZB1Q8WU39 189 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 TEKT4Q8WW24 435 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 FAM151AQ8WW52 585 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 STMN2Q93045 179 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 ZBTB10Q96DT7 871 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 MCEEQ96PE7 176 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 TAAR1Q96RJ0 339 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 MMADHCQ9H3L0 296 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 SYNCQ9H7C4 482 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 CNTN6Q9UQ52 1028 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 SIGLEC16A6NMB1 481 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 F8VP50 259 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 GOLGA8RI6L899 631 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 PSMG1O95456 288 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 MT-ND3P03897 115 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 SP100P23497 879 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 ZNF252P-AS1Q0IIN9 211 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 PIGHQ14442 188 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 KPNB1Q14974 876 aaKnown RBP12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 KRT72Q14CN4 511 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 ACSBG2Q5FVE4 666 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 THEMIS2Q5TEJ8 643 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 AP1ARQ63HQ0 302 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 LRRC6Q86X45 466 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 CPXCR1Q8N123 301 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 DCAKDQ8WVC6 231 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 SCG3Q8WXD2 468 aaKnown RBP12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 SKA1Q96BD8 255 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 TMEM120AQ9BXJ8 343 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 MAP3K20Q9NYL2 800 aaKnown RBP12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 DLGAP2Q9P1A6 1054 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 SCOCQ9UIL1 159 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 PCDHA10Q9Y5I2 948 aa12.41□□□□□ -0.42
VIPAS39-211ENST00000557658 ARID2Q68CP9 1835 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 CAPN9O14815 690 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 LPXNO60711 386 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 DKC1O60832 514 aaKnown RBP eCLIP12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 DGAT1O75907 488 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 KRT36O76013 467 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 ESRRAP11474 423 aaPredicted RBP12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 TSHRP16473 764 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 SERPINB3P29508 390 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 TAP1Q03518 808 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 RCN2Q14257 317 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 GNPTABQ3T906 1256 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 FNBP1LQ5T0N5 605 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 CIAPIN1Q6FI81 312 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 LRRC74BQ6ZQY2 392 aa12.4□□□□□ -0.42
VIPAS39-211ENST00000557658 TAS1R3Q7RTX0 852 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms