RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 NLRP12P59046 1061 aa15.2■□□□□ 0.02
SLIRP-210ENST00000557431 RUNX3Q13761 415 aa15.2■□□□□ 0.02
SLIRP-210ENST00000557431 TCEAL6Q6IPX3 200 aa15.2■□□□□ 0.02
SLIRP-210ENST00000557431 OSTM1Q86WC4 334 aa15.2■□□□□ 0.02
SLIRP-210ENST00000557431 THEM5Q8N1Q8 247 aa15.2■□□□□ 0.02
SLIRP-210ENST00000557431 LARP4BQ92615 738 aaKnown RBP15.2■□□□□ 0.02
SLIRP-210ENST00000557431 KCNN1Q92952 543 aa15.2■□□□□ 0.02
SLIRP-210ENST00000557431 TCEAL3Q969E4 200 aa15.2■□□□□ 0.02
SLIRP-210ENST00000557431 SAAL1Q96ER3 474 aa15.2■□□□□ 0.02
SLIRP-210ENST00000557431 FAM83CQ9BQN1 747 aa15.2■□□□□ 0.02
SLIRP-210ENST00000557431 CHD8Q9HCK8 2581 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 EIF5BO60841 1220 aaKnown RBP15.19■□□□□ 0.02
SLIRP-210ENST00000557431 RPP40O75818 363 aaKnown RBP15.19■□□□□ 0.02
SLIRP-210ENST00000557431 FGF19O95750 216 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 CCDC192P0DO97 292 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 ADSSP30520 456 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 POLR2BP30876 1174 aaKnown RBP15.19■□□□□ 0.02
SLIRP-210ENST00000557431 CNR2P34972 360 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 PLCB2Q00722 1185 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 BFSP1Q12934 665 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 DDR2Q16832 855 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 ST3GAL2Q16842 350 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 TMEM196Q5HYL7 178 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 C1orf228Q6PIY5 440 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 CD302Q8IX05 232 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 SPPL2BQ8TCT7 592 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 NOC3LQ8WTT2 800 aaKnown RBP15.19■□□□□ 0.02
SLIRP-210ENST00000557431 POMGNT1Q8WZA1 660 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 EZH1Q92800 747 aaPredicted RBP15.19■□□□□ 0.02
SLIRP-210ENST00000557431 EPSTI1Q96J88 318 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 CHAMP1Q96JM3 812 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 AK8Q96MA6 479 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 SLC22A12Q96S37 553 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 TRPC7Q9HCX4 862 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 DERAQ9Y315 318 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 KIF3AQ9Y496 699 aa15.19■□□□□ 0.02
SLIRP-210ENST00000557431 ASCC3Q8N3C0 2202 aaKnown RBP15.19■□□□□ 0.02
SLIRP-210ENST00000557431 GOLGA8IPA6NC78 632 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 GOLGA8JA6NMD2 632 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 KPNA7A9QM74 516 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 DCLK1O15075 740 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 ITGB3P05106 788 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 CYP2F1P24903 491 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 AVPR1AP37288 418 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 SF3A1Q15459 793 aaKnown RBP15.18■□□□□ 0.02
SLIRP-210ENST00000557431 LMBRD2Q68DH5 695 aaPredicted RBP15.18■□□□□ 0.02
SLIRP-210ENST00000557431 KCTD17Q8N5Z5 321 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 C12orf50Q8NA57 414 aaPredicted RBP15.18■□□□□ 0.02
SLIRP-210ENST00000557431 GAB3Q8WWW8 586 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 CYP2S1Q96SQ9 504 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 FGFBP2Q9BYJ0 223 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 ASB7Q9H672 318 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 THG1LQ9NWX6 298 aaKnown RBP15.18■□□□□ 0.02
SLIRP-210ENST00000557431 HSFX1Q9UBD0 423 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 DSEQ9UL01 958 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 L1RE1Q9UN81 338 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 SLC8A2Q9UPR5 921 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 INVSQ9Y283 1065 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 C2CD2Q9Y426 696 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 PCDHB5Q9Y5E4 795 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 WNT6Q9Y6F9 365 aa15.18■□□□□ 0.02
SLIRP-210ENST00000557431 EPN2O95208 641 aa15.17■□□□□ 0.02
SLIRP-210ENST00000557431 WEE1P30291 646 aa15.17■□□□□ 0.02
SLIRP-210ENST00000557431 GALK1P51570 392 aa15.17■□□□□ 0.02
SLIRP-210ENST00000557431 TFAMQ00059 246 aaKnown RBP15.17■□□□□ 0.02
SLIRP-210ENST00000557431 PSMD2Q13200 908 aa15.17■□□□□ 0.02
SLIRP-210ENST00000557431 RABEP1Q15276 862 aa15.17■□□□□ 0.02
SLIRP-210ENST00000557431 SV2CQ496J9 727 aa15.17■□□□□ 0.02
SLIRP-210ENST00000557431 N4BP2L1Q5TBK1 243 aaPredicted RBP15.17■□□□□ 0.02
SLIRP-210ENST00000557431 IL31Q6EBC2 164 aa15.17■□□□□ 0.02
SLIRP-210ENST00000557431 PDCL2Q8N4E4 241 aa15.17■□□□□ 0.02
SLIRP-210ENST00000557431 RPLP0P6Q8NHW5 317 aa15.17■□□□□ 0.02
SLIRP-210ENST00000557431 TSPAN18Q96SJ8 248 aa15.17■□□□□ 0.02
SLIRP-210ENST00000557431 FAM213AQ9BRX8 229 aa15.17■□□□□ 0.02
SLIRP-210ENST00000557431 TDP1Q9NUW8 608 aa15.17■□□□□ 0.02
SLIRP-210ENST00000557431 AGAP1Q9UPQ3 857 aa15.17■□□□□ 0.02
SLIRP-210ENST00000557431 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.17■□□□□ 0.02
SLIRP-210ENST00000557431 STYXL1Q9Y6J8 313 aa15.17■□□□□ 0.02
SLIRP-210ENST00000557431 TRDMT1O14717 391 aaKnown RBP15.16■□□□□ 0.02
SLIRP-210ENST00000557431 GJA4P35212 333 aa15.16■□□□□ 0.02
SLIRP-210ENST00000557431 CASP5P51878 434 aa15.16■□□□□ 0.02
SLIRP-210ENST00000557431 TSPY1Q01534 308 aa15.16■□□□□ 0.02
SLIRP-210ENST00000557431 GRSF1Q12849 480 aaKnown RBP eCLIP15.16■□□□□ 0.02
SLIRP-210ENST00000557431 ZNF720Q7Z2F6 126 aa15.16■□□□□ 0.02
SLIRP-210ENST00000557431 DCP1BQ8IZD4 617 aaKnown RBP15.16■□□□□ 0.02
SLIRP-210ENST00000557431 SYNPOQ8N3V7 929 aa15.16■□□□□ 0.02
SLIRP-210ENST00000557431 C1orf127Q8N9H9 656 aa15.16■□□□□ 0.02
SLIRP-210ENST00000557431 C2orf15Q8WU43 125 aaKnown RBP15.16■□□□□ 0.02
SLIRP-210ENST00000557431 MRPS31Q92665 395 aaKnown RBP15.16■□□□□ 0.02
SLIRP-210ENST00000557431 ZNF560Q96MR9 790 aa15.16■□□□□ 0.02
SLIRP-210ENST00000557431 CLIC6Q96NY7 704 aa15.16■□□□□ 0.02
SLIRP-210ENST00000557431 CCSER1Q9C0I3 900 aa15.16■□□□□ 0.02
SLIRP-210ENST00000557431 DDX43Q9NXZ2 648 aaKnown RBP15.16■□□□□ 0.02
SLIRP-210ENST00000557431 RALYQ9UKM9 306 aaKnown RBP15.16■□□□□ 0.02
SLIRP-210ENST00000557431 GTF3C4Q9UKN8 822 aa15.16■□□□□ 0.02
SLIRP-210ENST00000557431 SMC3Q9UQE7 1217 aa15.16■□□□□ 0.02
SLIRP-210ENST00000557431 CLIC4Q9Y696 253 aa15.16■□□□□ 0.02
SLIRP-210ENST00000557431 USP24Q9UPU5 2620 aa15.15■□□□□ 0.02
SLIRP-210ENST00000557431 PLXND1Q9Y4D7 1925 aa15.15■□□□□ 0.02
SLIRP-210ENST00000557431 MYMKA6NI61 221 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms