RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 UGT1A5P35504 534 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 P2RX3P56373 397 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 TSPY1Q01534 308 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 DPYSQ14117 519 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 MOGQ16653 247 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 INSCQ1MX18 579 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 ISLR2Q6UXK2 745 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 NT5DC3Q86UY8 548 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.46□□□□□ -0.1
SHMT2-226ENST00000556825 THAP11Q96EK4 314 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 ZNF641Q96N77 438 aaPredicted RBP14.46□□□□□ -0.1
SHMT2-226ENST00000556825 CIB1Q99828 191 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 NAPBQ9H115 298 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 UGT1A7Q9HAW7 530 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 UGT1A10Q9HAW8 530 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 UGT1A8Q9HAW9 530 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 KIAA1586Q9HCI6 787 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 HMGXB4Q9UGU5 601 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 PCDHGB4Q9UN71 923 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 DTNAQ9Y4J8 743 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 PCDHGB5Q9Y5G0 923 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 MYH11P35749 1972 aa14.46□□□□□ -0.1
SHMT2-226ENST00000556825 ZMYM2Q9UBW7 1377 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 A0A1W2PRG0 241 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 GOLGA8IPA6NC78 632 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 SGTAO43765 313 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 SNX2O60749 519 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 IDH1O75874 414 aaKnown RBP14.45□□□□□ -0.1
SHMT2-226ENST00000556825 ALX3O95076 343 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 TGFB3P10600 412 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 IREB2P48200 963 aaKnown RBP14.45□□□□□ -0.1
SHMT2-226ENST00000556825 ZBTB16Q05516 673 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 SELENBP1Q13228 472 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 CLUL1Q15846 466 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 MAN2A1Q16706 1144 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 CWF19L2Q2TBE0 894 aaKnown RBP14.45□□□□□ -0.1
SHMT2-226ENST00000556825 DNAL1Q4LDG9 190 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 CEP78Q5JTW2 689 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 TRIML2Q8N7C3 387 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 RFWD2Q8NHY2 731 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 PYDC1Q8WXC3 89 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 TMIGD2Q96BF3 282 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 CAAP1Q9H8G2 361 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 ERVK-5Q9HDB9 667 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 GPR108Q9NPR9 543 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 ADAMTS1Q9UHI8 967 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 DCTN4Q9UJW0 460 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 AGO2Q9UKV8 859 aaKnown RBP14.45□□□□□ -0.1
SHMT2-226ENST00000556825 MTO1Q9Y2Z2 717 aaKnown RBP14.45□□□□□ -0.1
SHMT2-226ENST00000556825 ALS2Q96Q42 1657 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 SNTNA6NMZ2 147 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 ZNF701M0R085 212 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-226ENST00000556825 PSMD11O00231 422 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 ENPP3O14638 875 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 PRPF4O43172 522 aaKnown RBP eCLIP14.45□□□□□ -0.11e-8■■■□□ 17.5
SHMT2-226ENST00000556825 CDH16O75309 829 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 CCDC130P13994 396 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 IL32P24001 234 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 CDK16Q00536 496 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 HP1BP3Q5SSJ5 553 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-226ENST00000556825 OGFRL1Q5TC84 451 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-226ENST00000556825 FRA10AC1Q70Z53 315 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 AMIGO2Q86SJ2 522 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 CCDC25Q86WR0 208 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 CAPSLQ8WWF8 208 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 TRUB1Q8WWH5 349 aaKnown RBP14.45□□□□□ -0.1
SHMT2-226ENST00000556825 PSPC1Q8WXF1 523 aaKnown RBP14.45□□□□□ -0.1
SHMT2-226ENST00000556825 CLPTM1LQ96KA5 538 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 DBNDD2Q9BQY9 259 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 ZBED2Q9BTP6 218 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 THTPAQ9BU02 230 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 LGR6Q9HBX8 967 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 VPS45Q9NRW7 570 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 ANKMY1Q9P2S6 941 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 DSEQ9UL01 958 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 GRID1Q9ULK0 1009 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 ATP11BQ9Y2G3 1177 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 SPEF1Q9Y4P9 236 aa14.45□□□□□ -0.1
SHMT2-226ENST00000556825 RGPD5Q99666 1765 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 CAPN8A6NHC0 703 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 MARCH6O60337 910 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 FGAP02671 866 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 PRKCAP17252 672 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 ADCY8P40145 1251 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 TFAP4Q01664 338 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 UBE4AQ14139 1066 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 OXA1LQ15070 435 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 STILQ15468 1287 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 GRAMD1BQ3KR37 738 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 GPR180Q86V85 440 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 SLC25A41Q8N5S1 370 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 POU5F2Q8N7G0 328 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 RBM15BQ8NDT2 890 aaKnown RBP14.44□□□□□ -0.1
SHMT2-226ENST00000556825 ADAMTS16Q8TE57 1224 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 SH3RF3Q8TEJ3 882 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-226ENST00000556825 ZNF75CPQ92670 426 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-226ENST00000556825 LRRC59Q96AG4 307 aaKnown RBP14.44□□□□□ -0.1
SHMT2-226ENST00000556825 RMDN1Q96DB5 314 aa14.44□□□□□ -0.1
SHMT2-226ENST00000556825 PRR11Q96HE9 360 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-226ENST00000556825 COQ7Q99807 217 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms