RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 CRTAC1Q9NQ79 661 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 AVENQ9NQS1 362 aaPredicted RBP11.11□□□□□ -0.63
SNX6-208ENST00000556712 IGSF9Q9P2J2 1179 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 HOOK1Q9UJC3 728 aaKnown RBP11.11□□□□□ -0.63
SNX6-208ENST00000556712 PCDHB5Q9Y5E4 795 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 COL4A2P08572 1712 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 GREB1Q4ZG55 1949 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 NCANO14594 1321 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 TICRRQ7Z2Z1 1910 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 MAPK13O15264 365 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 STAU1O95793 577 aaKnown RBP11.1□□□□□ -0.63
SNX6-208ENST00000556712 HLA-DRAP01903 254 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 KRT13P13646 458 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 BMP6P22004 513 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 WARSP23381 471 aaKnown RBP11.1□□□□□ -0.63
SNX6-208ENST00000556712 FCARP24071 287 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 CYP2F1P24903 491 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 RPL13P26373 211 aaKnown RBP11.1□□□□□ -0.63
SNX6-208ENST00000556712 PCSK1P29120 753 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 PSMC2P35998 433 aaKnown RBP11.1□□□□□ -0.63
SNX6-208ENST00000556712 PIK3CAP42336 1068 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 LHX1P48742 406 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 EPHA5P54756 1037 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 VCPP55072 806 aaKnown RBP11.1□□□□□ -0.63
SNX6-208ENST00000556712 CDH8P55286 799 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 UBE2HP62256 183 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 CYP4F8P98187 520 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 CAMK4Q16566 473 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 DDR2Q16832 855 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 MDH1BQ5I0G3 518 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 ANKRD40Q6AI12 368 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 KLHL10Q6JEL2 608 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 INTS8Q75QN2 995 aaKnown RBP11.1□□□□□ -0.63
SNX6-208ENST00000556712 GAREM2Q75VX8 874 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 SV2AQ7L0J3 742 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 DNAJB7Q7Z6W7 309 aaPredicted RBP11.1□□□□□ -0.63
SNX6-208ENST00000556712 SPATA2LQ8IUW3 424 aaPredicted RBP11.1□□□□□ -0.63
SNX6-208ENST00000556712 ADSSL1Q8N142 457 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 SLC44A3Q8N4M1 653 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 OR6B3Q8NGW1 331 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 SPATA18Q8TC71 538 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 TAS1R2Q8TE23 839 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 C2orf15Q8WU43 125 aaKnown RBP11.1□□□□□ -0.63
SNX6-208ENST00000556712 SYAP1Q96A49 352 aaPredicted RBP11.1□□□□□ -0.63
SNX6-208ENST00000556712 ZSWIM3Q96MP5 696 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 PLA2G2FQ9BZM2 168 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 SNX25Q9H3E2 840 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 CTNND2Q9UQB3 1225 aa11.1□□□□□ -0.63
SNX6-208ENST00000556712 ZFP37Q9Y6Q3 630 aaPredicted RBP11.1□□□□□ -0.63
SNX6-208ENST00000556712 ZNF318Q5VUA4 2279 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 ZNF197O14709 1029 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 LRRN2O75325 713 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 EPB41P11171 864 aaKnown RBP11.09□□□□□ -0.63
SNX6-208ENST00000556712 SRFP11831 508 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 GABRR2P28476 465 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 ATICP31939 592 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 TUFMP49411 452 aaKnown RBP11.09□□□□□ -0.63
SNX6-208ENST00000556712 AP3M2P53677 418 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 SMARCB1Q12824 385 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 ORC1Q13415 861 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 VEPH1Q14D04 833 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 NFE2Q16621 373 aaPredicted RBP11.09□□□□□ -0.63
SNX6-208ENST00000556712 COBLL1Q53SF7 1204 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 DCAF17Q5H9S7 520 aaPredicted RBP11.09□□□□□ -0.63
SNX6-208ENST00000556712 ZNF667Q5HYK9 610 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 FAM78AQ5JUQ0 283 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 IER5LQ5T953 404 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 TANGO2Q6ICL3 276 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 MTSS1LQ765P7 747 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 DPH6Q7L8W6 267 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 GPIHBP1Q8IV16 184 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 SCN4BQ8IWT1 228 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 ZC3H3Q8IXZ2 948 aaKnown RBP11.09□□□□□ -0.63
SNX6-208ENST00000556712 ELOA2Q8IYF1 753 aaPredicted RBP11.09□□□□□ -0.63
SNX6-208ENST00000556712 TSG101Q99816 390 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 SLITRK6Q9H5Y7 841 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 VRTNQ9H8Y1 702 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 GDE1Q9NZC3 331 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 HSFX1Q9UBD0 423 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 HMGXB4Q9UGU5 601 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 FBXL21Q9UKT6 434 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 CDH9Q9ULB4 789 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 CA14Q9ULX7 337 aa11.09□□□□□ -0.63
SNX6-208ENST00000556712 MAGED2Q9UNF1 606 aaPredicted RBP11.09□□□□□ -0.63
SNX6-208ENST00000556712 KIF26AQ9ULI4 1882 aaPredicted RBP11.08□□□□□ -0.64
SNX6-208ENST00000556712 MYO16Q9Y6X6 1858 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 ANAPC1Q9H1A4 1944 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 PATJQ8NI35 1801 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 KRBA1A5PL33 1030 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 A8MXQ7 604 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 IKBKBO14920 756 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 CETN3O15182 167 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 TACC1O75410 805 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 ASS1P00966 412 aaKnown RBP11.08□□□□□ -0.64
SNX6-208ENST00000556712 BDNFP23560 247 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 CCNE1P24864 410 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 GNL1P36915 607 aaPredicted RBP11.08□□□□□ -0.64
SNX6-208ENST00000556712 CACNA2D1P54289 1103 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 NOP14P78316 857 aaKnown RBP11.08□□□□□ -0.64
SNX6-208ENST00000556712 CYP27A1Q02318 531 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms