RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 C9orf57Q5W0N0 161 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 TTC27Q6P3X3 843 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 LCLAT1Q6UWP7 414 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 DPH6Q7L8W6 267 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 IQCKQ8N0W5 287 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 SMC1BQ8NDV3 1235 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 IPO4Q8TEX9 1081 aaKnown RBP10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 GRK7Q8WTQ7 553 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 SLCO2A1Q92959 643 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 ZBTB9Q96C00 473 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 RBM41Q96IZ5 413 aaKnown RBP10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 CPXM1Q96SM3 734 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 OSBPL8Q9BZF1 889 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 ARHGAP39Q9C0H5 1083 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 DNAI2Q9GZS0 605 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 UPF3AQ9H1J1 476 aaKnown RBP10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 CXCL16Q9H2A7 254 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 DDX56Q9NY93 547 aaKnown RBP10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 TUBGCP4Q9UGJ1 667 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 CYTH4Q9UIA0 394 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 ADAM21Q9UKJ8 722 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 GABRQQ9UN88 632 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 GOLGA8KD6RF30 607 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 GOLGA8SH3BPF8 625 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 PGK1P00558 417 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 RALAP11233 206 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 CYP3A5P20815 502 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 RFC1P35251 1148 aaPredicted RBP10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 COPS2P61201 443 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 NKX3-2P78367 333 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 ZNF252P-AS1Q0IIN9 211 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 PDCLQ13371 301 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 MTMR3Q13615 1198 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 NBPF20Q3BBV1 942 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 XKR4Q5GH76 650 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 FBXO47Q5MNV8 452 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 UBXN11Q5T124 520 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 TWF2Q6IBS0 349 aaKnown RBP10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 CXCL17Q6UXB2 119 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 UNC93AQ86WB7 457 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 XYLT1Q86Y38 959 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 RIN2Q8WYP3 895 aaPredicted RBP10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 C18orf25Q96B23 403 aaPredicted RBP10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 ZNF560Q96MR9 790 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 ZIM3Q96PE6 472 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 FMO2Q99518 471 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 SH3GL2Q99962 352 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 NEUROG2Q9H2A3 272 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 TSPAN16Q9UKR8 245 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 IPPQ9Y573 584 aa10.66□□□□□ -0.7
EFCAB11-209ENST00000556005 PIRO00625 290 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 ERBB2P04626 1255 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 PSMA2P25787 234 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 GJC1P36383 396 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 SNX16P57768 344 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 MRPS6P82932 125 aaKnown RBP10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 OGDHQ02218 1023 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 NFX1Q12986 1120 aaKnown RBP10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 KLF1Q13351 362 aaPredicted RBP10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 ACAP1Q15027 740 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 LLGL1Q15334 1064 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 PPP1R7Q15435 360 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 CCNG2Q16589 344 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 HADHQ16836 314 aaKnown RBP10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 SYDE1Q6ZW31 735 aaPredicted RBP10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 POLNQ7Z5Q5 900 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 OR6B3Q8NGW1 331 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 ATL2Q8NHH9 583 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 UBA3Q8TBC4 463 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 C1orf54Q8WWF1 131 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 EXOC4Q96A65 974 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 MCRS1Q96EZ8 462 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 MRPL45Q9BRJ2 306 aaKnown RBP10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 HEMGNQ9BXL5 484 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 FAM129AQ9BZQ8 928 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 GPBP1L1Q9HC44 474 aaPredicted RBP10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 PRDM10Q9NQV6 1147 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 KLK14Q9P0G3 267 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 PTPN22Q9Y2R2 807 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 SNX24Q9Y343 169 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 TRPV2Q9Y5S1 764 aa10.65□□□□□ -0.7
EFCAB11-209ENST00000556005 KPNA7A9QM74 516 aa10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 PPEF2O14830 753 aa10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 RPS6KA5O75582 802 aa10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 TJP3O95049 919 aa10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 GAS8O95995 478 aa10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 HSD17B3P37058 310 aa10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 KCNJ1P48048 391 aa10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 PLTPP55058 493 aa10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 PRKCZQ05513 592 aa10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 NOGQ13253 232 aa10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 SPDYCQ5MJ68 293 aa10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 GDF6Q6KF10 455 aaPredicted RBP10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 CYP4F22Q6NT55 531 aa10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 FAM228AQ86W67 206 aa10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 C12orf29Q8N999 325 aa10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 SMG8Q8ND04 991 aaKnown RBP10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 RNF25Q96BH1 459 aaPredicted RBP10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 DCLK3Q9C098 648 aa10.64□□□□□ -0.71
EFCAB11-209ENST00000556005 CHST12Q9NRB3 414 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms