RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 PAPSS2O95340 614 aaPredicted RBP21.21■□□□□ 0.99
PRKCH-219ENST00000555906 TMEM191BP0C7N4 346 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 HMGA1P17096 107 aaKnown RBP21.21■□□□□ 0.99
PRKCH-219ENST00000555906 NLRP12P59046 1061 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 MYL7Q01449 175 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 E2F4Q16254 413 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 INTS6LQ5JSJ4 861 aaKnown RBP21.21■□□□□ 0.99
PRKCH-219ENST00000555906 DGKKQ5KSL6 1271 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 TXNDC11Q6PKC3 985 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 TMEM150AQ86TG1 271 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 GPIHBP1Q8IV16 184 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 CMTM8Q8IZV2 173 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 SPEM1Q8N4L4 309 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 TOP6BLQ8N6T0 577 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 CELF5Q8N6W0 485 aaKnown RBP21.21■□□□□ 0.99
PRKCH-219ENST00000555906 PKMYT1Q99640 499 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 PANK2Q9BZ23 570 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 LRRC27Q9C0I9 530 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 PDE11AQ9HCR9 933 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 FOXD4L1Q9NU39 408 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 DDX43Q9NXZ2 648 aaKnown RBP21.21■□□□□ 0.99
PRKCH-219ENST00000555906 GTSE1Q9NYZ3 720 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 SIX4Q9UIU6 781 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 SOBPA7XYQ1 873 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 PPP6R2O75170 966 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 CSH1P0DML2 217 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 CSH2P0DML3 217 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 CXCL12P48061 93 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 RBP5P82980 135 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 SATB1Q01826 763 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 GAS6Q14393 721 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 WDR44Q5JSH3 913 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 ADGRF2Q8IZF7 708 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 CSGALNACT2Q8N6G5 542 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 GPR161Q8N6U8 529 aaKnown RBP21.2■□□□□ 0.98
PRKCH-219ENST00000555906 PI4K2AQ9BTU6 479 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 SLC46A2Q9BY10 475 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 BACH2Q9BYV9 841 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 PCIF1Q9H4Z3 704 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 KIF9Q9HAQ2 790 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 KBTBD4Q9NVX7 518 aa21.2■□□□□ 0.98
PRKCH-219ENST00000555906 THG1LQ9NWX6 298 aaKnown RBP21.2■□□□□ 0.98
PRKCH-219ENST00000555906 SPTLC2O15270 562 aa21.19■□□□□ 0.98
PRKCH-219ENST00000555906 PRPF40AO75400 957 aaKnown RBP21.19■□□□□ 0.98
PRKCH-219ENST00000555906 F11P03951 625 aa21.19■□□□□ 0.98
PRKCH-219ENST00000555906 KRT19P08727 400 aa21.19■□□□□ 0.98
PRKCH-219ENST00000555906 AVPR1AP37288 418 aa21.19■□□□□ 0.98
PRKCH-219ENST00000555906 NOC3LQ8WTT2 800 aaKnown RBP21.19■□□□□ 0.98
PRKCH-219ENST00000555906 TRMT2BQ96GJ1 504 aaKnown RBP21.19■□□□□ 0.98
PRKCH-219ENST00000555906 ANKRD36BP1Q96IX9 119 aa21.19■□□□□ 0.98
PRKCH-219ENST00000555906 FAM84AQ96KN4 292 aa21.19■□□□□ 0.98
PRKCH-219ENST00000555906 TRIM9Q9C026 710 aa21.19■□□□□ 0.98
PRKCH-219ENST00000555906 SMG9Q9H0W8 520 aaKnown RBP21.19■□□□□ 0.98
PRKCH-219ENST00000555906 RBM12Q9NTZ6 932 aaKnown RBP21.19■□□□□ 0.98
PRKCH-219ENST00000555906 UXTQ9UBK9 157 aaPredicted RBP21.19■□□□□ 0.98
PRKCH-219ENST00000555906 SNX9Q9Y5X1 595 aa21.19■□□□□ 0.98
PRKCH-219ENST00000555906 TULP1O00294 542 aaPredicted RBP21.18■□□□□ 0.98
PRKCH-219ENST00000555906 EIF3DO15371 548 aaKnown RBP eCLIP21.18■□□□□ 0.98
PRKCH-219ENST00000555906 NOL4O94818 638 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 YEATS4O95619 227 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 ACAT1P24752 427 aaKnown RBP21.18■□□□□ 0.98
PRKCH-219ENST00000555906 PCSK1P29120 753 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 LHX1P48742 406 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 GPR15P49685 360 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 RPL10AP62906 217 aaKnown RBP21.18■□□□□ 0.98
PRKCH-219ENST00000555906 TNK2Q07912 1038 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 CCINQ13939 588 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 PUM1Q14671 1186 aaKnown RBP eCLIP21.18■□□□□ 0.98
PRKCH-219ENST00000555906 SURF1Q15526 300 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 ITPRIPL2Q3MIP1 535 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 CFAP221Q4G0U5 840 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 CNNM4Q6P4Q7 775 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 Q6ZS52 159 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 OSTM1Q86WC4 334 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 GLIS3Q8NEA6 775 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 MRPS31Q92665 395 aaKnown RBP21.18■□□□□ 0.98
PRKCH-219ENST00000555906 FUBP3Q96I24 572 aaKnown RBP eCLIP21.18■□□□□ 0.98
PRKCH-219ENST00000555906 ZNF396Q96N95 335 aaPredicted RBP21.18■□□□□ 0.98
PRKCH-219ENST00000555906 INTS13Q9NVM9 706 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 DLL3Q9NYJ7 618 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 PTPRJQ12913 1337 aa21.18■□□□□ 0.98
PRKCH-219ENST00000555906 GABRDO14764 452 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 TADA3O75528 432 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 TNNC2P02585 160 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 AMPD3Q01432 767 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 MYO1EQ12965 1108 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 PON2Q15165 354 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 SCARA3Q6AZY7 606 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 CBWD2Q8IUF1 395 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 SYNPOQ8N3V7 929 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 MAB21L3Q8N8X9 362 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 STKLD1Q8NE28 680 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 TTC8Q8TAM2 541 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 HPS3Q969F9 1004 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 HSPBP1Q9NZL4 362 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 GMEB2Q9UKD1 530 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 RAB23Q9ULC3 237 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 CCL26Q9Y258 94 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 UBE4BO95155 1302 aa21.17■□□□□ 0.98
PRKCH-219ENST00000555906 KIAA1549LQ6ZVL6 1849 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms