RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 PTPN1P18031 435 aaKnown RBP11.72□□□□□ -0.53
TMEM260-208ENST00000555905 ACAT1P24752 427 aaKnown RBP11.72□□□□□ -0.53
TMEM260-208ENST00000555905 CTNNB1P35222 781 aa11.72□□□□□ -0.53
TMEM260-208ENST00000555905 BMPR1AP36894 532 aa11.72□□□□□ -0.53
TMEM260-208ENST00000555905 PSMC1P62191 440 aaKnown RBP11.72□□□□□ -0.53
TMEM260-208ENST00000555905 GFPT1Q06210 699 aaPredicted RBP11.72□□□□□ -0.53
TMEM260-208ENST00000555905 SLC18A3Q16572 532 aa11.72□□□□□ -0.53
TMEM260-208ENST00000555905 CTXN3Q4LDR2 81 aa11.72□□□□□ -0.53
TMEM260-208ENST00000555905 ZNF280DQ6N043 979 aa11.72□□□□□ -0.53
TMEM260-208ENST00000555905 RAD9BQ6WBX8 426 aa11.72□□□□□ -0.53
TMEM260-208ENST00000555905 ANKS3Q6ZW76 656 aa11.72□□□□□ -0.53
TMEM260-208ENST00000555905 GLYCTKQ8IVS8 523 aa11.72□□□□□ -0.53
TMEM260-208ENST00000555905 TFAP2BQ92481 460 aa11.72□□□□□ -0.53
TMEM260-208ENST00000555905 DDX1Q92499 740 aaKnown RBP11.72□□□□□ -0.53
TMEM260-208ENST00000555905 SYT11Q9BT88 431 aa11.72□□□□□ -0.53
TMEM260-208ENST00000555905 PLVAPQ9BX97 442 aa11.72□□□□□ -0.53
TMEM260-208ENST00000555905 SPTLC3Q9NUV7 552 aa11.72□□□□□ -0.53
TMEM260-208ENST00000555905 CEP83Q9Y592 693 aa11.72□□□□□ -0.53
TMEM260-208ENST00000555905 NME7Q9Y5B8 376 aa11.72□□□□□ -0.53
TMEM260-208ENST00000555905 CEP290O15078 2479 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 ATP8B3O60423 1300 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 A0A087X0T9 212 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.71□□□□□ -0.53
TMEM260-208ENST00000555905 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.71□□□□□ -0.53
TMEM260-208ENST00000555905 LINC01553A4QN01 128 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 OR6C75A6NL08 312 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 GRXCR1A8MXD5 290 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 EIF3CLB5ME19 914 aaKnown RBP11.71□□□□□ -0.53
TMEM260-208ENST00000555905 HCRTO43612 131 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 LSM8O95777 96 aaKnown RBP11.71□□□□□ -0.53
TMEM260-208ENST00000555905 EFEMP2O95967 443 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 SOD2P04179 222 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 FAM228BP0C875 321 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 GLUD2P49448 558 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 KRT83P78385 493 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 FMO1Q01740 532 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 PLCB3Q01970 1234 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 MTF1Q14872 753 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 MAPRE1Q15691 268 aaKnown RBP11.71□□□□□ -0.53
TMEM260-208ENST00000555905 RAB30Q15771 203 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 CNGA2Q16280 664 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 ASTE1Q2TB18 679 aaPredicted RBP11.71□□□□□ -0.53
TMEM260-208ENST00000555905 MDH1BQ5I0G3 518 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 INTS6LQ5JSJ4 861 aaKnown RBP11.71□□□□□ -0.53
TMEM260-208ENST00000555905 RTP2Q5QGT7 225 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 C10orf76Q5T2E6 689 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 ARHGAP17Q68EM7 881 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 FAM109BQ6ICB4 259 aaPredicted RBP11.71□□□□□ -0.53
TMEM260-208ENST00000555905 PPP1R2P3Q6NXS1 205 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 LCLAT1Q6UWP7 414 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 TAS1R1Q7RTX1 841 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 DCP1BQ8IZD4 617 aaKnown RBP11.71□□□□□ -0.53
TMEM260-208ENST00000555905 C12orf29Q8N999 325 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 MYCBPAPQ8TBZ2 947 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 RIN2Q8WYP3 895 aaPredicted RBP11.71□□□□□ -0.53
TMEM260-208ENST00000555905 CYFIP2Q96F07 1278 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 B3GALT6Q96L58 329 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 SAMD11Q96NU1 681 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 EIF3CQ99613 913 aaKnown RBP11.71□□□□□ -0.53
TMEM260-208ENST00000555905 RTP3Q9BQQ7 232 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 HERC2P3Q9BVR0 1158 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 FAM49BQ9NUQ9 324 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 HESX1Q9UBX0 185 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 MSRAQ9UJ68 235 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 PCDHGC3Q9UN70 934 aa11.71□□□□□ -0.53
TMEM260-208ENST00000555905 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.71□□□□□ -0.53
TMEM260-208ENST00000555905 M0QYV0 167 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 O00370 1275 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 DDX3XO00571 662 aaKnown RBP eCLIP11.7□□□□□ -0.54
TMEM260-208ENST00000555905 ATP2C2O75185 946 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 MICAL2O94851 1124 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 LCA5LO95447 670 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 URODP06132 367 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 CA3P07451 260 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 CCDC175P0C221 793 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 LINC00271P0C7V0 271 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 GZMAP12544 262 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 CCDC130P13994 396 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 MYOGP15173 224 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 SSTR3P32745 418 aaPredicted RBP11.7□□□□□ -0.54
TMEM260-208ENST00000555905 SLC8A3P57103 927 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 CYP27A1Q02318 531 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 DSG1Q02413 1049 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 MRPL58Q14197 206 aaKnown RBP11.7□□□□□ -0.54
TMEM260-208ENST00000555905 PSMD5Q16401 504 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 CLEC16AQ2KHT3 1053 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 GOLGA7BQ2TAP0 167 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 CCDC122Q5T0U0 273 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 PPP1R26Q5T8A7 1209 aaPredicted RBP11.7□□□□□ -0.54
TMEM260-208ENST00000555905 ALKBH5Q6P6C2 394 aaKnown RBP11.7□□□□□ -0.54
TMEM260-208ENST00000555905 TOGARAM2Q6ZUX3 1019 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 PASD1Q8IV76 773 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 RNF168Q8IYW5 571 aaPredicted RBP11.7□□□□□ -0.54
TMEM260-208ENST00000555905 TDHQ8IZJ6 230 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 VPS52Q8N1B4 723 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 TXLNBQ8N3L3 684 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 KLHL23Q8NBE8 558 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 TMEM35BQ8NCS4 154 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 OR10T2Q8NGX3 314 aa11.7□□□□□ -0.54
TMEM260-208ENST00000555905 SLC30A5Q8TAD4 765 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms