RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 TIMM13Q9Y5L4 95 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-220ENST00000555634 A0A1W2PPC1 479 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 LINC01553A4QN01 128 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 GOLGA6L9A6NEM1 432 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 SOWAHDA6NJG2 315 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 F8W810 466 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 GABRDO14764 452 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 PTPN1P18031 435 aaKnown RBP11.88□□□□□ -0.51
SHMT2-220ENST00000555634 FECHP22830 423 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 ACAT1P24752 427 aaKnown RBP11.88□□□□□ -0.51
SHMT2-220ENST00000555634 MSNP26038 577 aaKnown RBP11.88□□□□□ -0.51
SHMT2-220ENST00000555634 CLCN1P35523 988 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 BMPR1AP36894 532 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 ORC1Q13415 861 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 PDE12Q6L8Q7 609 aaKnown RBP11.88□□□□□ -0.51
SHMT2-220ENST00000555634 LIMS2Q7Z4I7 341 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 IRF2BP2Q7Z5L9 587 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 NOP9Q86U38 636 aaKnown RBP11.88□□□□□ -0.51
SHMT2-220ENST00000555634 GPIHBP1Q8IV16 184 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 GLYCTKQ8IVS8 523 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 VPS52Q8N1B4 723 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 CRYBG2Q8N1P7 616 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 KLHL23Q8NBE8 558 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 PIK3R5Q8WYR1 880 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 PPP2R3CQ969Q6 453 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 CYFIP2Q96F07 1278 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 GPR62Q9BZJ7 368 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 TSGA10Q9BZW7 698 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 TLR9Q9NR96 1032 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 ARHGAP20Q9P2F6 1191 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 HMGXB4Q9UGU5 601 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 NOCTQ9UK39 431 aaKnown RBP11.88□□□□□ -0.51
SHMT2-220ENST00000555634 MTUS1Q9ULD2 1270 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 STRIP2Q9ULQ0 834 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 PCDHGC3Q9UN70 934 aa11.88□□□□□ -0.51
SHMT2-220ENST00000555634 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.88□□□□□ -0.51
SHMT2-220ENST00000555634 MKI67P46013 3256 aaKnown RBP11.88□□□□□ -0.51
SHMT2-220ENST00000555634 PLXNA3P51805 1871 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-220ENST00000555634 EIF3CLB5ME19 914 aaKnown RBP11.87□□□□□ -0.51
SHMT2-220ENST00000555634 C5orf67F2Z3F1 127 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 RNF225M0QZC1 329 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-220ENST00000555634 C2CD2LO14523 706 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 NDUFA10O95299 355 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 ADH1AP07327 375 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 MYBL1P10243 752 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 DNAJB2P25686 324 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 ADORA2BP29275 332 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 NDUFV1P49821 464 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 ARPP19P56211 112 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 SMAD3P84022 425 aaKnown RBP11.87□□□□□ -0.51
SHMT2-220ENST00000555634 CCZ1BP86790 482 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 CCZ1P86791 482 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-220ENST00000555634 DSG1Q02413 1049 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 BST2Q10589 180 aaKnown RBP11.87□□□□□ -0.51
SHMT2-220ENST00000555634 PTPROQ16827 1216 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 SLC39A12Q504Y0 691 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 ARHGAP17Q68EM7 881 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 CHRDL2Q6WN34 429 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 TMC7Q7Z402 723 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 MYCBPAPQ8TBZ2 947 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 SPPL2BQ8TCT7 592 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 ZNF606Q8WXB4 792 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 CTNNBL1Q8WYA6 563 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-220ENST00000555634 FUBP3Q96I24 572 aaKnown RBP eCLIP11.87□□□□□ -0.51
SHMT2-220ENST00000555634 EIF3CQ99613 913 aaKnown RBP11.87□□□□□ -0.51
SHMT2-220ENST00000555634 TCF25Q9BQ70 676 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 LMAN2LQ9H0V9 348 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 DPEP3Q9H4B8 488 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 ABCB6Q9NP58 842 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 DMAP1Q9NPF5 467 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-220ENST00000555634 KRT82Q9NSB4 513 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 MTRRQ9UBK8 725 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 ADAMTS1Q9UHI8 967 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 DPP7Q9UHL4 492 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 TSPAN16Q9UKR8 245 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 PCDHB5Q9Y5E4 795 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 BACE2Q9Y5Z0 518 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 ATG2AQ2TAZ0 1938 aa11.87□□□□□ -0.51
SHMT2-220ENST00000555634 MTCL1Q9Y4B5 1905 aaKnown RBP11.87□□□□□ -0.51
SHMT2-220ENST00000555634 LCHNA4D1U4 455 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 ANKRD62A6NC57 917 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 RBAK-RBAKDNI3L0D1 243 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 O00370 1275 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 TRIM66O15016 1216 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 CALB1P05937 261 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 MMEP08473 750 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 CTSAP10619 480 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 CCDC130P13994 396 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 ELF1P32519 619 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 GFPT1Q06210 699 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-220ENST00000555634 CNGA2Q16280 664 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 ARHGAP29Q52LW3 1261 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 RTP2Q5QGT7 225 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 CCDC122Q5T0U0 273 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 LIN9Q5TKA1 542 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 E4F1Q66K89 784 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-220ENST00000555634 HGSNATQ68CP4 663 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 SCARA3Q6AZY7 606 aa11.86□□□□□ -0.51
SHMT2-220ENST00000555634 ALKBH5Q6P6C2 394 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms