RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 PDGFBP01127 241 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-215ENST00000555616 SRFP11831 508 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 PRKCSHP14314 528 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-215ENST00000555616 CEBPBP17676 345 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 PTPN2P17706 415 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 CASP4P49662 377 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 RBP5P82980 135 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 FANCCQ00597 558 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 CYP24A1Q07973 514 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 TWF1Q12792 350 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 SMARCB1Q12824 385 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 KRT31Q15323 416 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 MAN2A1Q16706 1144 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 MTSS1LQ765P7 747 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 METTL23Q86XA0 190 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 ELMOD1Q8N336 334 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 PDCL2Q8N4E4 241 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 TTC9BQ8N6N2 239 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 SPATA18Q8TC71 538 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 ING5Q8WYH8 240 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 FGF14Q92915 247 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 ANKRD36BP1Q96IX9 119 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 TMEM209Q96SK2 561 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 CGRRF1Q99675 332 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 CORO1BQ9BR76 489 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 TUBGCP2Q9BSJ2 902 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 TRIM5Q9C035 493 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 GDE1Q9NZC3 331 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 L1RE1Q9UN81 338 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 PES1O00541 588 aaKnown RBP10.31□□□□□ -0.76
ACTN1-215ENST00000555616 NRG2O14511 850 aaPredicted RBP10.31□□□□□ -0.76
ACTN1-215ENST00000555616 ZNF197O14709 1029 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 NARSO43776 548 aaKnown RBP10.31□□□□□ -0.76
ACTN1-215ENST00000555616 STX10O60499 249 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 HUS1O60921 280 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 TNNC2P02585 160 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 CCR2P41597 374 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 COPB1P53618 953 aaKnown RBP10.31□□□□□ -0.76
ACTN1-215ENST00000555616 VCPP55072 806 aaKnown RBP10.31□□□□□ -0.76
ACTN1-215ENST00000555616 UBASH3AP57075 661 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 ENPEPQ07075 957 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 BFSP1Q12934 665 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 DUSP4Q13115 394 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 DUOXA2Q1HG44 320 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 FKBP15Q5T1M5 1219 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 TCERG1LQ5VWI1 586 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 LMBRD2Q68DH5 695 aaPredicted RBP10.31□□□□□ -0.76
ACTN1-215ENST00000555616 SCARA3Q6AZY7 606 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 IQCEQ6IPM2 695 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 PARM1Q6UWI2 310 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 PDZD4Q76G19 769 aaPredicted RBP10.31□□□□□ -0.76
ACTN1-215ENST00000555616 LIMS2Q7Z4I7 341 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 TMC8Q8IU68 726 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 TRIM59Q8IWR1 403 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 THEM5Q8N1Q8 247 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 TMEM86AQ8N2M4 240 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 TOP6BLQ8N6T0 577 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 RDH13Q8NBN7 331 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 ATAD1Q8NBU5 361 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 C2orf15Q8WU43 125 aaKnown RBP10.31□□□□□ -0.76
ACTN1-215ENST00000555616 LRRC3Q9BY71 257 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 ASAH2Q9NR71 780 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 SLC2A4RGQ9NR83 387 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 TAB2Q9NYJ8 693 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 IFNKQ9P0W0 207 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 WNT16Q9UBV4 365 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.31□□□□□ -0.76
ACTN1-215ENST00000555616 SCN1AP35498 2009 aa10.31□□□□□ -0.76
ACTN1-215ENST00000555616 NOTCH4Q99466 2003 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 LRRC10BA6NIK2 292 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 LGALS16A8MUM7 142 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 MOSPD3O75425 235 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 ECI2O75521 394 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 KRT19P08727 400 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 DLATP10515 647 aaKnown RBP10.3□□□□□ -0.76
ACTN1-215ENST00000555616 ATF6P18850 670 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 FCARP24071 287 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 ALDH1A3P47895 512 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 VAMP7P51809 220 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 NUBP1P53384 320 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 EPHB3P54753 998 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 CCDC173Q0VFZ6 552 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 MYO1EQ12965 1108 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 VWA3BQ502W6 1294 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 SLC39A12Q504Y0 691 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 DCAF17Q5H9S7 520 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-215ENST00000555616 CYP4A22Q5TCH4 519 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 CWF19L1Q69YN2 538 aaKnown RBP10.3□□□□□ -0.76
ACTN1-215ENST00000555616 POTEHQ6S545 545 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 TRAPPC11Q7Z392 1133 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 LRRTM3Q86VH5 581 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 ADGRF2Q8IZF7 708 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 SPPL2BQ8TCT7 592 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 TMC2Q8TDI7 906 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 PSMG2Q969U7 264 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 CCDC127Q96BQ5 260 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 TCEAL4Q96EI5 215 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 HPDLQ96IR7 371 aa10.3□□□□□ -0.76
ACTN1-215ENST00000555616 ZNF512Q96ME7 567 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-215ENST00000555616 PKMYT1Q99640 499 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms