RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 ZNF197O14709 1029 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 PSMA7O14818 248 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 CETN3O15182 167 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 TACC1O75410 805 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 MOSPD3O75425 235 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 EPB41P11171 864 aaKnown RBP14.68□□□□□ -0.06
SHMT2-219ENST00000555563 GJA1P17302 382 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 GCLMP48507 274 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 GPR15P49685 360 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 FKBP3Q00688 224 aaKnown RBP14.68□□□□□ -0.06
SHMT2-219ENST00000555563 LRRC63Q05C16 580 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 ENPEPQ07075 957 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 STIM1Q13586 685 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 VEPH1Q14D04 833 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 ZNF667Q5HYK9 610 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 CYP4A22Q5TCH4 519 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 PARM1Q6UWI2 310 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 SCARA5Q6ZMJ2 495 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 CLEC17AQ6ZS10 378 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 HFE2Q6ZVN8 426 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 FAM200AQ8TCP9 573 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 FGF14Q92915 247 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 PSMG2Q969U7 264 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 SNX25Q9H3E2 840 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 MMRN2Q9H8L6 949 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 ZNF334Q9HCZ1 680 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-219ENST00000555563 ABCB6Q9NP58 842 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 CRTAC1Q9NQ79 661 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 DUSP12Q9UNI6 340 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 ASB3Q9Y575 518 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 MYO10Q9HD67 2058 aa14.68□□□□□ -0.06
SHMT2-219ENST00000555563 SLC16A3O15427 465 aaKnown RBP14.67□□□□□ -0.06
SHMT2-219ENST00000555563 NARSO43776 548 aaKnown RBP14.67□□□□□ -0.06
SHMT2-219ENST00000555563 MICAL2O94851 1124 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 HLA-DRAP01903 254 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 PDGFRBP09619 1106 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 CCNE1P24864 410 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 CYP2F1P24903 491 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 PPP1R2P41236 205 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 RAP1GAPP47736 663 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 CAMK4Q16566 473 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 KLHL10Q6JEL2 608 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 FAM171BQ6P995 826 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 MTSS1LQ765P7 747 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 DNAJB7Q7Z6W7 309 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-219ENST00000555563 SPATA2LQ8IUW3 424 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-219ENST00000555563 SLC44A3Q8N4M1 653 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 STKLD1Q8NE28 680 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 OR6B3Q8NGW1 331 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 SHKBP1Q8TBC3 707 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 GPR152Q8TDT2 470 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 TAS1R2Q8TE23 839 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 GIPC2Q8TF65 315 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 NXPE3Q969Y0 559 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 MYLPFQ96A32 169 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 MCRS1Q96EZ8 462 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 DHTKD1Q96HY7 919 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-219ENST00000555563 IPO9Q96P70 1041 aaKnown RBP14.67□□□□□ -0.06
SHMT2-219ENST00000555563 KXD1Q9BQD3 176 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 SDCBP2Q9H190 292 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.67□□□□□ -0.061e-9■■■■■ 76.9
SHMT2-219ENST00000555563 GDE1Q9NZC3 331 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 CTNND2Q9UQB3 1225 aa14.67□□□□□ -0.06
SHMT2-219ENST00000555563 PTPRDP23468 1912 aa14.66□□□□□ -0.06
SHMT2-219ENST00000555563 A0A1W2PRU2 124 aa14.66□□□□□ -0.06
SHMT2-219ENST00000555563 PPP1R3GB7ZBB8 358 aa14.66□□□□□ -0.06
SHMT2-219ENST00000555563 ASS1P00966 412 aaKnown RBP14.66□□□□□ -0.06
SHMT2-219ENST00000555563 GNL1P36915 607 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-219ENST00000555563 MCCD1P59942 119 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-219ENST00000555563 TEAD2Q15562 447 aa14.66□□□□□ -0.06
SHMT2-219ENST00000555563 SGSM1Q2NKQ1 1148 aa14.66□□□□□ -0.06
SHMT2-219ENST00000555563 CFAP221Q4G0U5 840 aa14.66□□□□□ -0.06
SHMT2-219ENST00000555563 SDHAF4Q5VUM1 108 aa14.66□□□□□ -0.06
SHMT2-219ENST00000555563 SPOPLQ6IQ16 392 aa14.66□□□□□ -0.06
SHMT2-219ENST00000555563 TTI2Q6NXR4 508 aa14.66□□□□□ -0.06
SHMT2-219ENST00000555563 ITIH5Q86UX2 942 aa14.66□□□□□ -0.06
SHMT2-219ENST00000555563 NELFBQ8WX92 580 aa14.66□□□□□ -0.06
SHMT2-219ENST00000555563 TAF4BQ92750 862 aa14.66□□□□□ -0.06
SHMT2-219ENST00000555563 FUBP3Q96I24 572 aaKnown RBP eCLIP14.66□□□□□ -0.06
SHMT2-219ENST00000555563 RPP25Q9BUL9 199 aaKnown RBP14.66□□□□□ -0.06
SHMT2-219ENST00000555563 KCNH6Q9H252 994 aa14.66□□□□□ -0.06
SHMT2-219ENST00000555563 DPEP3Q9H4B8 488 aa14.66□□□□□ -0.06
SHMT2-219ENST00000555563 TMEM8AQ9HCN3 771 aa14.66□□□□□ -0.06
SHMT2-219ENST00000555563 A8MXQ7 604 aa14.65□□□□□ -0.06
SHMT2-219ENST00000555563 PDGFBP01127 241 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-219ENST00000555563 FAM163BP0C2L3 166 aa14.65□□□□□ -0.06
SHMT2-219ENST00000555563 SRFP11831 508 aa14.65□□□□□ -0.06
SHMT2-219ENST00000555563 FCARP24071 287 aa14.65□□□□□ -0.06
SHMT2-219ENST00000555563 GTF2H1P32780 548 aa14.65□□□□□ -0.06
SHMT2-219ENST00000555563 ASPAP45381 313 aa14.65□□□□□ -0.06
SHMT2-219ENST00000555563 MXI1P50539 228 aa14.65□□□□□ -0.06
SHMT2-219ENST00000555563 CDH8P55286 799 aa14.65□□□□□ -0.06
SHMT2-219ENST00000555563 NOP14P78316 857 aaKnown RBP14.65□□□□□ -0.06
SHMT2-219ENST00000555563 CYP27A1Q02318 531 aa14.65□□□□□ -0.06
SHMT2-219ENST00000555563 MAPRE1Q15691 268 aaKnown RBP14.65□□□□□ -0.06
SHMT2-219ENST00000555563 DCAF17Q5H9S7 520 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-219ENST00000555563 MDH1BQ5I0G3 518 aa14.65□□□□□ -0.06
SHMT2-219ENST00000555563 FAM78AQ5JUQ0 283 aa14.65□□□□□ -0.06
SHMT2-219ENST00000555563 C4orf50Q6ZRC1 276 aa14.65□□□□□ -0.06
SHMT2-219ENST00000555563 GAREM2Q75VX8 874 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms