RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 VNN2O95498 520 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 PAEPP09466 180 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 OR4Q2P0C623 313 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 NRIP1P48552 1158 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 POLR2FP61218 127 aaKnown RBP13.51□□□□□ -0.25
SYNE2-219ENST00000555323 ADAM15Q13444 863 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 DRAP1Q14919 205 aaPredicted RBP13.51□□□□□ -0.25
SYNE2-219ENST00000555323 CTC1Q2NKJ3 1217 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 TMEM270Q6UE05 265 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 RNF19BQ6ZMZ0 732 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 RBM23Q86U06 439 aaKnown RBP13.51□□□□□ -0.25
SYNE2-219ENST00000555323 PALB2Q86YC2 1186 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 FAM71AQ8IYT1 594 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 EFHBQ8N7U6 833 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 SLC4A11Q8NBS3 891 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 B3GALNT2Q8NCR0 500 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 IQCDQ96DY2 449 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 FUBP3Q96I24 572 aaKnown RBP eCLIP13.51□□□□□ -0.25
SYNE2-219ENST00000555323 TTYH3Q9C0H2 523 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 DPEP3Q9H4B8 488 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 PLEKHA4Q9H4M7 779 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 TMLHEQ9NVH6 421 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 HMGXB4Q9UGU5 601 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 AJAP1Q9UKB5 411 aaPredicted RBP13.51□□□□□ -0.25
SYNE2-219ENST00000555323 PCDHB4Q9Y5E5 795 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 HCFC2Q9Y5Z7 792 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 COL4A4P53420 1690 aaPredicted RBP13.5□□□□□ -0.25
SYNE2-219ENST00000555323 MTMR11A4FU01 709 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 CSPG5O95196 566 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 GLUD1P00367 558 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 CPB1P15086 417 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 TRIM21P19474 475 aaKnown RBP13.5□□□□□ -0.25
SYNE2-219ENST00000555323 CA8P35219 290 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 JAM2P57087 298 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 CFAP221Q4G0U5 840 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 PAQR9Q6ZVX9 377 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 ACOT1Q86TX2 421 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 TCEAL8Q8IYN2 117 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 SPPL2BQ8TCT7 592 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 PCED1BQ96HM7 432 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 PCMTD1Q96MG8 357 aaPredicted RBP13.5□□□□□ -0.25
SYNE2-219ENST00000555323 TRIM5Q9C035 493 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 ABCB6Q9NP58 842 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 DPP7Q9UHL4 492 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 FBXW11Q9UKB1 542 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 MYO6Q9UM54 1294 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 TSC2P49815 1807 aa13.5□□□□□ -0.25
SYNE2-219ENST00000555323 PRRC2BQ5JSZ5 2229 aaKnown RBP13.49□□□□□ -0.25
SYNE2-219ENST00000555323 A0A1W2PQJ5 194 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 F8VZ95 297 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 VDRP11473 427 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 FOSL2P15408 326 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 GTF2F1P35269 517 aaKnown RBP eCLIP13.49□□□□□ -0.25
SYNE2-219ENST00000555323 ARPP19P56211 112 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 PSMC1P62191 440 aaKnown RBP13.49□□□□□ -0.25
SYNE2-219ENST00000555323 ADCY1Q08828 1119 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 PTPN21Q16825 1174 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 ARHGAP44Q17R89 818 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 SLC39A12Q504Y0 691 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 ZNF394Q53GI3 561 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 ARHGAP17Q68EM7 881 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 C4orf50Q6ZRC1 276 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 GLYCTKQ8IVS8 523 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 VSTM4Q8IW00 320 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 C12orf29Q8N999 325 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 ATAD1Q8NBU5 361 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 RBBP8NLQ8NC74 664 aaPredicted RBP13.49□□□□□ -0.25
SYNE2-219ENST00000555323 KREMEN2Q8NCW0 462 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 VN1R2Q8NFZ6 395 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 BAP1Q92560 729 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 CASP10Q92851 521 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 MRFAP1L1Q96HT8 127 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 HEXIM2Q96MH2 286 aaKnown RBP13.49□□□□□ -0.25
SYNE2-219ENST00000555323 HNRNPABQ99729 332 aaKnown RBP13.49□□□□□ -0.25
SYNE2-219ENST00000555323 B3GNT5Q9BYG0 378 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 PCDHB5Q9Y5E4 795 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 TRANK1O15050 2925 aa13.49□□□□□ -0.25
SYNE2-219ENST00000555323 SEC24AO95486 1093 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 GLP2RO95838 553 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 HAPLN1P10915 354 aaPredicted RBP13.48□□□□□ -0.25
SYNE2-219ENST00000555323 EPCAMP16422 314 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 HOXA9P31269 272 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 ELF1P32519 619 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 CLCN1P35523 988 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 MAGEA11P43364 429 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 TUFMP49411 452 aaKnown RBP13.48□□□□□ -0.25
SYNE2-219ENST00000555323 ZNF75DP51815 510 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 BPIFB4P59827 614 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 PLCB2Q00722 1185 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 DUSP4Q13115 394 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 RAPGEF1Q13905 1077 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 CNGA2Q16280 664 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 MDH1BQ5I0G3 518 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 SPECC1LQ69YQ0 1117 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 VSTM1Q6UX27 236 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 CCDC149Q6ZUS6 474 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 FUKQ8N0W3 1084 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 MYLPFQ96A32 169 aa13.48□□□□□ -0.25
SYNE2-219ENST00000555323 PABPC5Q96DU9 382 aaKnown RBP13.48□□□□□ -0.25
SYNE2-219ENST00000555323 CYFIP2Q96F07 1278 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms