RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 NOTUMQ6P988 496 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 PDIK1LQ8N165 341 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 MMGT1Q8N4V1 131 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 TTC17Q96AE7 1141 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 MIEF2Q96C03 454 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 CFAP57Q96MR6 1250 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 TACO1Q9BSH4 297 aaKnown RBP12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 ZMYM2Q9UBW7 1377 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 CENPFP49454 3210 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 CCDC195A0A1B0GUA6 201 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 GTPBP10A4D1E9 387 aaKnown RBP12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 E5RJQ4 531 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 ATP9BO43861 1147 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 RFX1P22670 979 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 NCKAP1LP55160 1127 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 MAP3K7CLP57077 242 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 PDE1BQ01064 536 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 BYSLQ13895 437 aaKnown RBP12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 GEN1Q17RS7 908 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 BRSK2Q8IWQ3 736 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 RXFP2Q8WXD0 754 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 ACO2Q99798 780 aaKnown RBP12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 CARD9Q9H257 536 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 ASNSD1Q9NWL6 643 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 ABI2Q9NYB9 513 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 UBP1Q9NZI7 540 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 NR2E3Q9Y5X4 410 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 PTPRJQ12913 1337 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 MYPNQ86TC9 1320 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 CCDC189A1A4V9 331 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 PHF2O75151 1096 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 MAFO75444 373 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 BRAFP15056 766 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 NOVP48745 357 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 TAS2R40P59535 323 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 PSMD6Q15008 389 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 SLC7A14Q8TBB6 771 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 SHC3Q92529 594 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 EIF2AQ9BY44 585 aaKnown RBP12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 DCTN4Q9UJW0 460 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 CCDC88AQ3V6T2 1871 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 PODXLO00592 558 aa12.83□□□□□ -0.35
ARHGEF40-206ENST00000555232 KITP10721 976 aa12.83□□□□□ -0.35
ARHGEF40-206ENST00000555232 GNAT1P11488 350 aa12.83□□□□□ -0.35
ARHGEF40-206ENST00000555232 MMRN1Q13201 1228 aa12.83□□□□□ -0.35
ARHGEF40-206ENST00000555232 TAF5Q15542 800 aa12.83□□□□□ -0.35
ARHGEF40-206ENST00000555232 BMT2Q1RMZ1 405 aa12.83□□□□□ -0.35
ARHGEF40-206ENST00000555232 DEFB128Q7Z7B8 93 aa12.83□□□□□ -0.35
ARHGEF40-206ENST00000555232 FAM71AQ8IYT1 594 aa12.83□□□□□ -0.35
ARHGEF40-206ENST00000555232 RBM41Q96IZ5 413 aaKnown RBP12.83□□□□□ -0.35
ARHGEF40-206ENST00000555232 KLHL8Q9P2G9 620 aaPredicted RBP12.83□□□□□ -0.35
ARHGEF40-206ENST00000555232 CITO14578 2027 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 C17orf102A2RUQ5 167 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 CAND2O75155 1236 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 EZRP15311 586 aaKnown RBP12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 PPP2R5EQ16537 467 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 GLE1Q53GS7 698 aaKnown RBP12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 METTL23Q86XA0 190 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 ACTL9Q8TC94 416 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 PDCD6IPQ8WUM4 868 aaKnown RBP12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 PPP1R12CQ9BZL4 782 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 HOMER3Q9NSC5 361 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 PCDHGC5Q9Y5F6 944 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 CEP350Q5VT06 3117 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 CHUKO15111 745 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 P4HA2O15460 535 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 NCAM1P13591 858 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 CPB1P15086 417 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 SMPD1P17405 629 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 GRIK1P39086 918 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 MLH1P40692 756 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 RPL21P46778 160 aaKnown RBP12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 SNX16P57768 344 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 NPNTQ6UXI9 565 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 CACNA2D3Q8IZS8 1091 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 SAMD3Q8N6K7 520 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 STKLD1Q8NE28 680 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 SLC2A14Q8TDB8 520 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 HELQQ8TDG4 1101 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 FBF1Q8TES7 1133 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 RILPQ96NA2 401 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 NSRP1Q9H0G5 558 aaKnown RBP12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 TUBGCP4Q9UGJ1 667 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 HMGXB4Q9UGU5 601 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 BAIAP2L1Q9UHR4 511 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 RAB21Q9UL25 225 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 MYH11P35749 1972 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 SCN9AQ15858 1988 aa12.83□□□□□ -0.36
ARHGEF40-206ENST00000555232 PLA2G6O60733 806 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 STK10O94804 968 aaKnown RBP12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 ATXN8OSP0DMR3 200 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 MUTP22033 750 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 FLT3LGP49771 235 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 OTUD4Q01804 1114 aaKnown RBP12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 SDHAF4Q5VUM1 108 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 ALS2CLQ60I27 953 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 PID1Q7Z2X4 250 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 MIB1Q86YT6 1006 aa12.82□□□□□ -0.36
ARHGEF40-206ENST00000555232 ATL2Q8NHH9 583 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms