RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 GLUD2P49448 558 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 DSG1Q02413 1049 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 PRKCQQ04759 706 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 UBXN11Q5T124 520 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 WDR93Q6P2C0 686 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 LILRA6Q6PI73 481 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 GRASPQ7Z6J2 395 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-216ENST00000554975 RHPN2Q8IUC4 686 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 NELFCDQ8IXH7 590 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 COLGALT2Q8IYK4 626 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 LRRN4CLQ8ND94 238 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 ITFG1Q8TB96 612 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 URGCPQ8TCY9 931 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 SLC7A3Q8WY07 619 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 CLDN23Q96B33 292 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 NOX5Q96PH1 765 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 KXD1Q9BQD3 176 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 JPH2Q9BR39 696 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-216ENST00000554975 OSBPL6Q9BZF3 934 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 BHMT2Q9H2M3 363 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 MIOSQ9NXC5 875 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 ARHGAP20Q9P2F6 1191 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 SUCLA2Q9P2R7 463 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-216ENST00000554975 GMEB2Q9UKD1 530 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 PCDHA13Q9Y5I0 950 aa11.93□□□□□ -0.5
SHMT2-216ENST00000554975 IGKV6-21A0A0C4DH24 114 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 ARHGEF35A5YM69 484 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 GAS2O43903 313 aaKnown RBP11.92□□□□□ -0.5
SHMT2-216ENST00000554975 MAFO75444 373 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-216ENST00000554975 NR3C1P04150 777 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 SKIP12755 728 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 GUCY2CP25092 1073 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 MAGEA1P43355 309 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 OR1G1P47890 313 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 RAB27AP51159 221 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 ZNF131P52739 623 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 SNRPFP62306 86 aaKnown RBP11.92□□□□□ -0.5
SHMT2-216ENST00000554975 MTAPQ13126 283 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 PPP2R5AQ15172 486 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 GBP6Q6ZN66 633 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 TPRG1Q6ZUI0 275 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 CATSPER4Q7RTX7 472 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 ZNF572Q7Z3I7 529 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-216ENST00000554975 MRPL10Q7Z7H8 261 aaKnown RBP11.92□□□□□ -0.5
SHMT2-216ENST00000554975 C4orf19Q8IY42 314 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 EXOC8Q8IYI6 725 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 NETO1Q8TDF5 533 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 HDAC7Q8WUI4 952 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 BORCS6Q96GS4 357 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 NLRP4Q96MN2 994 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 FAM193BQ96PV7 902 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-216ENST00000554975 SPAG5Q96R06 1193 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 PARD6BQ9BYG5 372 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 IRX2Q9BZI1 471 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-216ENST00000554975 PLEKHA4Q9H4M7 779 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 CHST7Q9NS84 486 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 ZDHHC7Q9NXF8 308 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 AIPL1Q9NZN9 384 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 WRAP73Q9P2S5 460 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-216ENST00000554975 CDH7Q9ULB5 785 aa11.92□□□□□ -0.5
SHMT2-216ENST00000554975 TRIP11Q15643 1979 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 BTNL10A8MVZ5 291 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 ZBTB39O15060 712 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 ZMYND10O75800 440 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 SLITRK3O94933 977 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 PMLP29590 882 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 ABCD1P33897 745 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 RFC5P40937 340 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 KLK7P49862 253 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 CDC42EP1Q00587 391 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 RAPGEF1Q13905 1077 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 EXOC3L4Q17RC7 722 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 ARSHQ5FYA8 562 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 ZBTB41Q5SVQ8 909 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 POTEHQ6S545 545 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 HDXQ7Z353 690 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 FGF13Q92913 245 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 PGBD4Q96DM1 585 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 HSD17B14Q9BPX1 270 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 GPR62Q9BZJ7 368 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 PLA2G2FQ9BZM2 168 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 GANQ9H2C0 597 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 MINDY3Q9H8M7 445 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 IFT122Q9HBG6 1241 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 ZNF446Q9NWS9 450 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 STK39Q9UEW8 545 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 DPP7Q9UHL4 492 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 SNX12Q9UMY4 172 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 SSX2IPQ9Y2D8 614 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 PCDHB13Q9Y5F0 798 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 FHOD1Q9Y613 1164 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 WDFY3Q8IZQ1 3526 aa11.91□□□□□ -0.5
SHMT2-216ENST00000554975 EML5Q05BV3 1969 aa11.9□□□□□ -0.5
SHMT2-216ENST00000554975 CLSTN1O94985 981 aa11.9□□□□□ -0.5
SHMT2-216ENST00000554975 FERP16591 822 aa11.9□□□□□ -0.5
SHMT2-216ENST00000554975 HOXA11P31270 313 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-216ENST00000554975 PSMC2P35998 433 aaKnown RBP11.9□□□□□ -0.5
SHMT2-216ENST00000554975 PRKCIP41743 596 aa11.9□□□□□ -0.5
SHMT2-216ENST00000554975 PAFAH1B1P43034 410 aa11.9□□□□□ -0.5
SHMT2-216ENST00000554975 MAGEA9P43362 315 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms