RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 CACNB3P54284 484 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 PIGFQ07326 219 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 MPP3Q13368 585 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 SMN1Q16637 294 aaKnown RBP3.84□□□□□ -1.79
SCFD1-213ENST00000554776 CLNKQ7Z7G1 428 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 USP37Q86T82 979 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 LNX2Q8N448 690 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 NSUN7Q8NE18 718 aaKnown RBP3.84□□□□□ -1.79
SCFD1-213ENST00000554776 IL31RAQ8NI17 732 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 POC1BQ8TC44 478 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 ANKS1AQ92625 1134 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 DDX17Q92841 729 aaKnown RBP3.84□□□□□ -1.79
SCFD1-213ENST00000554776 CAVIN3Q969G5 261 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 P2RX7Q99572 595 aaKnown RBP3.84□□□□□ -1.79
SCFD1-213ENST00000554776 SMOQ99835 787 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 MYD88Q99836 296 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 CNPPD1Q9BV87 410 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 PCGF6Q9BYE7 350 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 TRIM54Q9BYV2 358 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 C11orf21Q9P2W6 132 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 TPCN1Q9ULQ1 816 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 DMTF1Q9Y222 760 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 SNX13Q9Y5W8 968 aa3.84□□□□□ -1.79
SCFD1-213ENST00000554776 TRGV11A0A075B6L2 103 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 A0A1W2PPL8 197 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 E7ENX8 843 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 M0QYG6 137 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 MYO1FO00160 1098 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 POLRMTO00411 1230 aaKnown RBP3.83□□□□□ -1.8
SCFD1-213ENST00000554776 FRS3O43559 492 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 UNC5CO95185 931 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 KIF20AO95235 890 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 MYF5P13349 255 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 SLC7A1P30825 629 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 ANXA11P50995 505 aaKnown RBP3.83□□□□□ -1.8
SCFD1-213ENST00000554776 AK2P54819 239 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 RPS7P62081 194 aaKnown RBP3.83□□□□□ -1.8
SCFD1-213ENST00000554776 TAP2Q03519 686 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 DYRK1AQ13627 763 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 C1orf228Q6PIY5 440 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 Q6ZNX1 250 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 LIX1LQ8IVB5 337 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 SMC5Q8IY18 1101 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 FAM186BQ8IYM0 893 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 SLC44A3Q8N4M1 653 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 PCSK9Q8NBP7 692 aaKnown RBP3.83□□□□□ -1.8
SCFD1-213ENST00000554776 PSD4Q8NDX1 1056 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 SSH3Q8TE77 659 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 KBTBD7Q8WVZ9 684 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 SLC9A6Q92581 669 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 GJA10Q969M2 543 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 TMEM125Q96AQ2 219 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 PTCD3Q96EY7 689 aaKnown RBP3.83□□□□□ -1.8
SCFD1-213ENST00000554776 CCDC138Q96M89 665 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 TRIB1Q96RU8 372 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 DPH1Q9BZG8 443 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 SIK2Q9H0K1 926 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 SYNPO2LQ9H987 977 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 PPCSQ9HAB8 311 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 PTPRHQ9HD43 1115 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 ALG13Q9NP73 1137 aaKnown RBP3.83□□□□□ -1.8
SCFD1-213ENST00000554776 NLRC4Q9NPP4 1024 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 CASS4Q9NQ75 786 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 CNNM1Q9NRU3 951 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 PIH1D1Q9NWS0 290 aaKnown RBP3.83□□□□□ -1.8
SCFD1-213ENST00000554776 KCTD5Q9NXV2 234 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-213ENST00000554776 CPNE7Q9UBL6 633 aa3.83□□□□□ -1.8
SCFD1-213ENST00000554776 RHPN2P1A8MT19 583 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 NCK2O43639 380 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 SRGNP10124 158 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 EN2P19622 333 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-213ENST00000554776 HTR3AP46098 478 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 TRAPPC10P48553 1259 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 SUMO3P55854 103 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-213ENST00000554776 BOP1Q14137 746 aaKnown RBP3.82□□□□□ -1.8
SCFD1-213ENST00000554776 MORC3Q14149 939 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 HLXQ14774 488 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-213ENST00000554776 FAM160B1Q5W0V3 765 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 TAF2Q6P1X5 1199 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 OLFML1Q6UWY5 402 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 ADGRG5Q8IZF4 528 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 FBXO41Q8TF61 875 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 APIPQ96GX9 242 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 RIPOR3Q96MK2 946 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 AIFM2Q9BRQ8 373 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 NUP62CLQ9H1M0 184 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 SMOC2Q9H3U7 446 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 KIAA1586Q9HCI6 787 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 PLCB1Q9NQ66 1216 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 INTS13Q9NVM9 706 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 HESX1Q9UBX0 185 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 PLEKHM1Q9Y4G2 1056 aa3.82□□□□□ -1.8
SCFD1-213ENST00000554776 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.82□□□□□ -1.8
SCFD1-213ENST00000554776 SALL3Q9BXA9 1300 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 F8W8V4 182 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 TOR1BO14657 336 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 DCLK1O15075 740 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 TBX3O15119 743 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms