RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 CEP57Q86XR8 500 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 DCP1BQ8IZD4 617 aaKnown RBP15.25■□□□□ 0.03
SHOX2-206ENST00000554685 TFAP2BQ92481 460 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 TRIM11Q96F44 468 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 NOX5Q96PH1 765 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 TTPALQ9BTX7 342 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 HERC2P3Q9BVR0 1158 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 GPR62Q9BZJ7 368 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 TSGA10Q9BZW7 698 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 KCND1Q9NSA2 647 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 PPP2R2CQ9Y2T4 447 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 PCDHA13Q9Y5I0 950 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 M0QYV0 167 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 RTN2O75298 545 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 SOD2P04179 222 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 CYP1A1P04798 512 aaPredicted RBP15.24■□□□□ 0.03
SHOX2-206ENST00000554685 H2AFZP0C0S5 128 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 SETSIPP0DME0 302 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 CDH5P33151 784 aaPredicted RBP15.24■□□□□ 0.03
SHOX2-206ENST00000554685 NSFP46459 744 aaKnown RBP15.24■□□□□ 0.03
SHOX2-206ENST00000554685 VAV2P52735 878 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 MRPL58Q14197 206 aaKnown RBP15.24■□□□□ 0.03
SHOX2-206ENST00000554685 SHHQ15465 462 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 CTXN3Q4LDR2 81 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 VARS2Q5ST30 1063 aaKnown RBP15.24■□□□□ 0.03
SHOX2-206ENST00000554685 C9orf50Q5SZB4 431 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 ACAD10Q6JQN1 1059 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 KIAA1841Q6NSI8 718 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 H2AFVQ71UI9 128 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 DDX53Q86TM3 631 aaKnown RBP15.24■□□□□ 0.03
SHOX2-206ENST00000554685 GPR65Q8IYL9 337 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 RNF168Q8IYW5 571 aaPredicted RBP15.24■□□□□ 0.03
SHOX2-206ENST00000554685 ACRBPQ8NEB7 543 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 CYFIP2Q96F07 1278 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 SAMD11Q96NU1 681 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 GDF15Q99988 308 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 DESI2Q9BSY9 194 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 PLVAPQ9BX97 442 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 MIS12Q9H081 205 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 DPEP3Q9H4B8 488 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 NENFQ9UMX5 172 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 SSX2IPQ9Y2D8 614 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 NME7Q9Y5B8 376 aa15.24■□□□□ 0.03
SHOX2-206ENST00000554685 MKI67P46013 3256 aaKnown RBP15.23■□□□□ 0.03
SHOX2-206ENST00000554685 MICAL2O94851 1124 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 EFEMP2O95967 443 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 ACAT1P24752 427 aaKnown RBP15.23■□□□□ 0.03
SHOX2-206ENST00000554685 BCAT1P54687 386 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 SNX16P57768 344 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 PSMC1P62191 440 aaKnown RBP15.23■□□□□ 0.03
SHOX2-206ENST00000554685 NOMO3P69849 1222 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 PLCB3Q01970 1234 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 CYP27A1Q02318 531 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 CREMQ03060 361 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 CENPCQ03188 943 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 SMARCB1Q12824 385 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 KIF5AQ12840 1032 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 NFE2Q16621 373 aaPredicted RBP15.23■□□□□ 0.03
SHOX2-206ENST00000554685 GOLGA7BQ2TAP0 167 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 MDH1BQ5I0G3 518 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 PPP1R26Q5T8A7 1209 aaPredicted RBP15.23■□□□□ 0.03
SHOX2-206ENST00000554685 C4orf50Q6ZRC1 276 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 ZNF662Q6ZS27 426 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 TMEM173Q86WV6 379 aaPredicted RBP15.23■□□□□ 0.03
SHOX2-206ENST00000554685 CCAR2Q8N163 923 aaKnown RBP15.23■□□□□ 0.03
SHOX2-206ENST00000554685 OLIG1Q8TAK6 271 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 MYCBPAPQ8TBZ2 947 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 BCL7CQ8WUZ0 217 aaPredicted RBP15.23■□□□□ 0.03
SHOX2-206ENST00000554685 PCDHB18PQ96TA0 734 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 HNRNPABQ99729 332 aaKnown RBP15.23■□□□□ 0.03
SHOX2-206ENST00000554685 RTP3Q9BQQ7 232 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 ISCUQ9H1K1 167 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 FAM49BQ9NUQ9 324 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 TSPAN16Q9UKR8 245 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 PCDHA11Q9Y5I1 949 aa15.23■□□□□ 0.03
SHOX2-206ENST00000554685 ANKRD62A6NC57 917 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 ZNF263O14978 683 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 KRT86O43790 486 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 CALCAP01258 141 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 FTLP02792 175 aaPredicted RBP15.22■□□□□ 0.03
SHOX2-206ENST00000554685 URODP06132 367 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 MYBL1P10243 752 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 UNGP13051 313 aaPredicted RBP15.22■□□□□ 0.03
SHOX2-206ENST00000554685 BMP8BP34820 402 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 CTNNB1P35222 781 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 BMPR1AP36894 532 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 GLUD2P49448 558 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 BST2Q10589 180 aaKnown RBP15.22■□□□□ 0.03
SHOX2-206ENST00000554685 ARHGAP29Q52LW3 1261 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 NAA35Q5VZE5 725 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 FAM171BQ6P995 826 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 PHF13Q86YI8 300 aaPredicted RBP15.22■□□□□ 0.03
SHOX2-206ENST00000554685 PASD1Q8IV76 773 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 C12orf29Q8N999 325 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 ANKRD52Q8NB46 1076 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 CTNNBL1Q8WYA6 563 aaPredicted RBP15.22■□□□□ 0.03
SHOX2-206ENST00000554685 PIK3R5Q8WYR1 880 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 VCPIP1Q96JH7 1222 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 ZSWIM1Q9BR11 485 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 MED10Q9BTT4 135 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms