RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 FAM83CQ9BQN1 747 aa13.17□□□□□ -0.3
MTHFD1-207ENST00000554677 PANK2Q9BZ23 570 aa13.17□□□□□ -0.3
MTHFD1-207ENST00000554677 HPS4Q9NQG7 708 aa13.17□□□□□ -0.3
MTHFD1-207ENST00000554677 OLFML3Q9NRN5 406 aa13.17□□□□□ -0.3
MTHFD1-207ENST00000554677 GKN1Q9NS71 199 aa13.17□□□□□ -0.3
MTHFD1-207ENST00000554677 ABI2Q9NYB9 513 aaPredicted RBP13.17□□□□□ -0.3
MTHFD1-207ENST00000554677 CCDC39Q9UFE4 941 aa13.17□□□□□ -0.3
MTHFD1-207ENST00000554677 SIX4Q9UIU6 781 aa13.17□□□□□ -0.3
MTHFD1-207ENST00000554677 L1RE1Q9UN81 338 aa13.17□□□□□ -0.3
MTHFD1-207ENST00000554677 AGAP1Q9UPQ3 857 aa13.17□□□□□ -0.3
MTHFD1-207ENST00000554677 CCL26Q9Y258 94 aa13.17□□□□□ -0.3
MTHFD1-207ENST00000554677 MORC2Q9Y6X9 1032 aaPredicted RBP13.17□□□□□ -0.3
MTHFD1-207ENST00000554677 CACNA1BQ00975 2339 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 GOLGA8IPA6NC78 632 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 GOLGA8JA6NMD2 632 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 GCNT3O95395 438 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 PDCP20941 246 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 GARTP22102 1010 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 POLR2BP30876 1174 aaKnown RBP13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 TFAMQ00059 246 aaKnown RBP13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 CEBPZQ03701 1054 aaKnown RBP13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 SRSF5Q13243 272 aaKnown RBP13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 LRRC32Q14392 662 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 VEPH1Q14D04 833 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 SLC39A14Q15043 492 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 DGKKQ5KSL6 1271 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 SDHAF4Q5VUM1 108 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 PKN3Q6P5Z2 889 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 OSTM1Q86WC4 334 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 DCP1BQ8IZD4 617 aaKnown RBP13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 USP13Q92995 863 aaPredicted RBP13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 USP28Q96RU2 1077 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 CBWD1Q9BRT8 395 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 PI4K2AQ9BTU6 479 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 GDAP2Q9NXN4 497 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 PCDHB5Q9Y5E4 795 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 ACACBO00763 2458 aa13.16□□□□□ -0.3
MTHFD1-207ENST00000554677 GON4LQ3T8J9 2241 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 HCRTO43612 131 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 TADA3O75528 432 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 PRPF6O94906 941 aaKnown RBP13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 ITGB3P05106 788 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 CENPBP07199 599 aaPredicted RBP13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 CYP2F1P24903 491 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 HOXA6P31267 233 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 PNPLA4P41247 253 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 PPP2R5DQ14738 602 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 DDR2Q16832 855 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 CCDC142Q17RM4 750 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 ITPRIPL2Q3MIP1 535 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 TXNDC8Q6A555 127 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 LIMS2Q7Z4I7 341 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 CSGALNACT2Q8N6G5 542 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 MAB21L3Q8N8X9 362 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 GLIS3Q8NEA6 775 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 LEO1Q8WVC0 666 aaPredicted RBP13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 SECISBP2LQ93073 1101 aaKnown RBP13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 ZNF560Q96MR9 790 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 ACBD6Q9BR61 282 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 PCIF1Q9H4Z3 704 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 PDE11AQ9HCR9 933 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 EXOC7Q9UPT5 735 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 MTMR6Q9Y217 621 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
MTHFD1-207ENST00000554677 HELZP42694 1942 aaKnown RBP13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 SOBPA7XYQ1 873 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 PRR5-ARHGAP8B1AHC4 643 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 GABRDO14764 452 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 EXTL3O43909 919 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 PRPF40AO75400 957 aaKnown RBP13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 LDHAP00338 332 aaKnown RBP13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 RETP07949 1114 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 IDEP14735 1019 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 ACAT1P24752 427 aaKnown RBP13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 HOXD13P35453 343 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 ARHGAP8P85298 464 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 SPEM2Q0P670 501 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 RUNX3Q13761 415 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 SOWAHAQ2M3V2 549 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 TMEM196Q5HYL7 178 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 INTS6LQ5JSJ4 861 aaKnown RBP13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 TRIM68Q6AZZ1 485 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 LAIR1Q6GTX8 287 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 CCDC73Q6ZRK6 1079 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 MON1AQ86VX9 555 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 SYNPOQ8N3V7 929 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 LRRC52Q8N7C0 313 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 CACTINQ8WUQ7 758 aaKnown RBP13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 FBRSL1Q9HCM7 1045 aaKnown RBP13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 TDP1Q9NUW8 608 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 PANK4Q9NVE7 773 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 THG1LQ9NWX6 298 aaKnown RBP13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 DDX43Q9NXZ2 648 aaKnown RBP13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 RBAKQ9NYW8 714 aaPredicted RBP13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 ZMYM5Q9UJ78 669 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 GMEB2Q9UKD1 530 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 GTF3C4Q9UKN8 822 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 USP18Q9UMW8 372 aa13.14□□□□□ -0.31
MTHFD1-207ENST00000554677 PTPRJQ12913 1337 aa13.13□□□□□ -0.31
MTHFD1-207ENST00000554677 KIAA1549LQ6ZVL6 1849 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms