RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 POLR2BP30876 1174 aaKnown RBP13.33□□□□□ -0.28
SHMT2-214ENST00000554604 ALDH1A3P47895 512 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 PMS1P54277 932 aaKnown RBP13.33□□□□□ -0.28
SHMT2-214ENST00000554604 EPHB3P54753 998 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 DUSP4Q13115 394 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 PLD1Q13393 1074 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 TRIM14Q14142 442 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 SURF1Q15526 300 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 SLC5A9Q2M3M2 681 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 ASTLQ6HA08 431 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-214ENST00000554604 CENPPQ6IPU0 288 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 PARM1Q6UWI2 310 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 EPM2AIP1Q7L775 607 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-214ENST00000554604 TMEM139Q8IV31 216 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 NELFCDQ8IXH7 590 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 CSGALNACT2Q8N6G5 542 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 TC2NQ8N9U0 490 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 KIAA0895Q8NCT3 520 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 ZNF507Q8TCN5 953 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 FGF14Q92915 247 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 MCRS1Q96EZ8 462 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 ANKRD36BP1Q96IX9 119 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 KIAA1586Q9HCI6 787 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 AVENQ9NQS1 362 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-214ENST00000554604 ASAH2Q9NR71 780 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 GDE1Q9NZC3 331 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 HSPBP1Q9NZL4 362 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 MAGEC2Q9UBF1 373 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-214ENST00000554604 WNT16Q9UBV4 365 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 ITGA11Q9UKX5 1188 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 YIPF1Q9Y548 306 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.33□□□□□ -0.28
SHMT2-214ENST00000554604 MIA3Q5JRA6 1907 aa13.33□□□□□ -0.28
SHMT2-214ENST00000554604 AKR1B15C9JRZ8 316 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-214ENST00000554604 ARHGAP6O43182 974 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 STX10O60499 249 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 TUBB4AP04350 444 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 MYL4P12829 197 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 CEBPBP17676 345 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 HOXD13P35453 343 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 CYP2J2P51589 502 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 CLCN5P51795 746 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 WNT7BP56706 349 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 BFSP1Q12934 665 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 SLC39A12Q504Y0 691 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 WSCD1Q658N2 575 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 E4F1Q66K89 784 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-214ENST00000554604 NYAP1Q6ZVC0 841 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 CBWD2Q8IUF1 395 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 C1orf127Q8N9H9 656 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 ATAD1Q8NBU5 361 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 LEMD2Q8NC56 503 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 PANX2Q96RD6 677 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 TMEM209Q96SK2 561 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 KXD1Q9BQD3 176 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 SRRTQ9BXP5 876 aaKnown RBP13.32□□□□□ -0.28
SHMT2-214ENST00000554604 MTMR12Q9C0I1 747 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 SLC39A2Q9NP94 309 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 CEP72Q9P209 647 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 CA14Q9ULX7 337 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 SLC27A5Q9Y2P5 690 aa13.32□□□□□ -0.28
SHMT2-214ENST00000554604 F5P12259 2224 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 A0A1W2PQC6 194 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 MTMR11A4FU01 709 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 LGALS16A8MUM7 142 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 CLIC2O15247 247 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 HUS1O60921 280 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 FGFR1OPO95684 399 aaKnown RBP13.31□□□□□ -0.28
SHMT2-214ENST00000554604 TNNC2P02585 160 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 TNNT1P13805 278 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 CDR1P51861 262 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 PTPN5P54829 565 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 SNRPFP62306 86 aaKnown RBP13.31□□□□□ -0.28
SHMT2-214ENST00000554604 RBP5P82980 135 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 LRRC63Q05C16 580 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 MYO1EQ12965 1108 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 SNRNP35Q16560 246 aaKnown RBP13.31□□□□□ -0.28
SHMT2-214ENST00000554604 DUOXA2Q1HG44 320 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 LMBRD2Q68DH5 695 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-214ENST00000554604 ANKRD40Q6AI12 368 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 HS6ST3Q8IZP7 471 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 LRRC52Q8N7C0 313 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 RDH13Q8NBN7 331 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 OR10T2Q8NGX3 314 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 GPR152Q8TDT2 470 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 SCFD1Q8WVM8 642 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 TCEAL4Q96EI5 215 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 FAM84AQ96KN4 292 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 FNBP1Q96RU3 617 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 BAG1Q99933 345 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-214ENST00000554604 RPP25Q9BUL9 199 aaKnown RBP13.31□□□□□ -0.28
SHMT2-214ENST00000554604 NAA15Q9BXJ9 866 aaKnown RBP13.31□□□□□ -0.28
SHMT2-214ENST00000554604 VPS16Q9H269 839 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 SLITRK6Q9H5Y7 841 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 AGPAT3Q9NRZ7 376 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 TAB2Q9NYJ8 693 aa13.31□□□□□ -0.28
SHMT2-214ENST00000554604 USP27XA6NNY8 438 aa13.3□□□□□ -0.28
SHMT2-214ENST00000554604 TGFB1I1O43294 461 aa13.3□□□□□ -0.28
SHMT2-214ENST00000554604 MICAL2O94851 1124 aa13.3□□□□□ -0.28
SHMT2-214ENST00000554604 VNN2O95498 520 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms