RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 MIS12Q9H081 205 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 CWH43Q9H720 699 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 LZTFL1Q9NQ48 299 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 AVENQ9NQS1 362 aaPredicted RBP8.12□□□□□ -1.11
TDP1-209ENST00000554180 MARCH5Q9NX47 278 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 DDX43Q9NXZ2 648 aaKnown RBP8.12□□□□□ -1.11
TDP1-209ENST00000554180 HESX1Q9UBX0 185 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 TSPAN16Q9UKR8 245 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 NME7Q9Y5B8 376 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 NR2E3Q9Y5X4 410 aa8.12□□□□□ -1.11
TDP1-209ENST00000554180 CEP290O15078 2479 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 M0QYV0 167 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 MTA2O94776 668 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 MICAL2O94851 1124 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 EFEMP2O95967 443 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 FTLP02792 175 aaPredicted RBP8.11□□□□□ -1.11
TDP1-209ENST00000554180 PDGFRBP09619 1106 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 PTPN1P18031 435 aaKnown RBP8.11□□□□□ -1.11
TDP1-209ENST00000554180 FGFR3P22607 806 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 MMP8P22894 467 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 IGFBP6P24592 240 aaPredicted RBP8.11□□□□□ -1.11
TDP1-209ENST00000554180 LMO2P25791 158 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 GPD2P43304 727 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 BCAT1P54687 386 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 HADHBP55084 474 aaKnown RBP8.11□□□□□ -1.11
TDP1-209ENST00000554180 GSCP56915 257 aaPredicted RBP8.11□□□□□ -1.11
TDP1-209ENST00000554180 BCAR1P56945 870 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 SLC8A3P57103 927 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 SNX16P57768 344 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 GPC5P78333 572 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 TSPY1Q01534 308 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 PLCB3Q01970 1234 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 BST2Q10589 180 aaKnown RBP8.11□□□□□ -1.11
TDP1-209ENST00000554180 BTG3Q14201 252 aaPredicted RBP8.11□□□□□ -1.11
TDP1-209ENST00000554180 PKDCCQ504Y2 493 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 INTS6LQ5JSJ4 861 aaKnown RBP8.11□□□□□ -1.11
TDP1-209ENST00000554180 PPP1R26Q5T8A7 1209 aaPredicted RBP8.11□□□□□ -1.11
TDP1-209ENST00000554180 LIN9Q5TKA1 542 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 RASIP1Q5U651 963 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 NAA35Q5VZE5 725 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 ZNF280DQ6N043 979 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 FUT10Q6P4F1 479 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 KCNT2Q6UVM3 1135 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 GPR65Q8IYL9 337 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 RNF168Q8IYW5 571 aaPredicted RBP8.11□□□□□ -1.11
TDP1-209ENST00000554180 MCOLN2Q8IZK6 566 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 ANKRD52Q8NB46 1076 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 C1orf131Q8NDD1 294 aaKnown RBP8.11□□□□□ -1.11
TDP1-209ENST00000554180 TRIM58Q8NG06 486 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 MYCBPAPQ8TBZ2 947 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 SP7Q8TDD2 431 aaPredicted RBP8.11□□□□□ -1.11
TDP1-209ENST00000554180 STK32AQ8WU08 396 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 UBE2Q2Q8WVN8 375 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 RABGGTAQ92696 567 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 DPF3Q92784 378 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 SECISBP2LQ93073 1101 aaKnown RBP8.11□□□□□ -1.11
TDP1-209ENST00000554180 CYFIP2Q96F07 1278 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 ALS2CR12Q96Q35 445 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 PACSIN1Q9BY11 444 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 CYLDQ9NQC7 956 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 AAASQ9NRG9 546 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 TAS2R14Q9NYV8 317 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 STRIP2Q9ULQ0 834 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 INSL6Q9Y581 213 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 SLC4A7Q9Y6M7 1214 aa8.11□□□□□ -1.11
TDP1-209ENST00000554180 MACROD2A1Z1Q3 448 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 CCDC85CA6NKD9 419 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 OR6C75A6NL08 312 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 TMCO5BA8MYB1 307 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 F8W810 466 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 H7C4K7 107 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 I3L4J1 428 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 CALCAP01258 141 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 CYP1A2P05177 515 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 CFHP08603 1231 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 ATP2A2P16615 1042 aaKnown RBP8.1□□□□□ -1.11
TDP1-209ENST00000554180 NPR3P17342 541 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 SYN1P17600 705 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 ABCB4P21439 1286 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 TKTP29401 623 aaKnown RBP8.1□□□□□ -1.11
TDP1-209ENST00000554180 PLA2G4AP47712 749 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 GABRB2P47870 512 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 EPHB4P54760 987 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 ETF1P62495 437 aaKnown RBP8.1□□□□□ -1.11
TDP1-209ENST00000554180 SMARCB1Q12824 385 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 PDCLQ13371 301 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 ORC1Q13415 861 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 MRPL58Q14197 206 aaKnown RBP8.1□□□□□ -1.11
TDP1-209ENST00000554180 GOLGA7BQ2TAP0 167 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 USP41Q3LFD5 358 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 VARS2Q5ST30 1063 aaKnown RBP8.1□□□□□ -1.11
TDP1-209ENST00000554180 FAM171A1Q5VUB5 890 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 DENND1BQ6P3S1 775 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 FAM171BQ6P995 826 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 C4orf50Q6ZRC1 276 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 ANKS3Q6ZW76 656 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 ERICH1Q86X53 443 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 PASD1Q8IV76 773 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 HERC6Q8IVU3 1022 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 SLC39A11Q8N1S5 342 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms