RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 NOVA1P51513 510 aaKnown RBP7.63□□□□□ -1.19
ATXN3-224ENST00000554040 IRAK1P51617 712 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 AAMPQ13685 434 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 PRR16Q569H4 304 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 RTP2Q5QGT7 225 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 AXDND1Q5T1B0 1012 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-224ENST00000554040 HEATR6Q6AI08 1181 aaKnown RBP7.63□□□□□ -1.19
ATXN3-224ENST00000554040 CDPF1Q6NVV7 123 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 RTL10Q7L3V2 364 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 CACNA2D4Q7Z3S7 1137 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 SRGAP1Q7Z6B7 1085 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 WDR5BQ86VZ2 330 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 RAB11FIP4Q86YS3 637 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 ZNF713Q8N859 430 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-224ENST00000554040 C2CD4AQ8NCU7 369 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-224ENST00000554040 LNX1Q8TBB1 728 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-224ENST00000554040 SLC7A14Q8TBB6 771 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 TMEM87BQ96K49 555 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 SH2D3AQ9BRG2 576 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 TTPALQ9BTX7 342 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 TRMT61BQ9BVS5 477 aaKnown RBP7.63□□□□□ -1.19
ATXN3-224ENST00000554040 MINDY3Q9H8M7 445 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 ZFP14Q9HCL3 533 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 BARHL2Q9NY43 387 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 GIT1Q9Y2X7 761 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 IPPQ9Y573 584 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 PCDHGA5Q9Y5G8 931 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 SLC12A7Q9Y666 1083 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 PIAS3Q9Y6X2 628 aa7.63□□□□□ -1.19
ATXN3-224ENST00000554040 NAV2Q8IVL1 2488 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 MYH9P35579 1960 aaKnown RBP7.62□□□□□ -1.19
ATXN3-224ENST00000554040 MYH15Q9Y2K3 1946 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 MTCL1Q9Y4B5 1905 aaKnown RBP7.62□□□□□ -1.19
ATXN3-224ENST00000554040 CACNA1EQ15878 2313 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 TMEM150BA6NC51 233 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 ADAM12O43184 909 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 PRC1O43663 620 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 TOP3BO95985 862 aaKnown RBP7.62□□□□□ -1.19
ATXN3-224ENST00000554040 RHOP08100 348 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 FCARP24071 287 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 CCNE1P24864 410 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 SFNP31947 248 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 JAK3P52333 1124 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 MLLT6P55198 1093 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-224ENST00000554040 ZNF252P-AS1Q0IIN9 211 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 RAB33AQ14088 237 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 GRM2Q14416 872 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 MSMPQ1L6U9 139 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 ZNF423Q2M1K9 1284 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 SLC5A9Q2M3M2 681 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 GSTCDQ8NEC7 633 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 ZCCHC14Q8WYQ9 949 aaKnown RBP7.62□□□□□ -1.19
ATXN3-224ENST00000554040 RABGGTAQ92696 567 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 LENG9Q96B70 501 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 TCF12Q99081 682 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 JPH2Q9BR39 696 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-224ENST00000554040 SCNM1Q9BWG6 230 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 EIF2AQ9BY44 585 aaKnown RBP7.62□□□□□ -1.19
ATXN3-224ENST00000554040 HES2Q9Y543 173 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 COL4A3BPQ9Y5P4 624 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 LAMA1P25391 3075 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 CELSR3Q9NYQ7 3312 aa7.62□□□□□ -1.19
ATXN3-224ENST00000554040 SF3B1O75533 1304 aaKnown RBP eCLIP7.61□□□□□ -1.194e-12■■■■■ 275.7
ATXN3-224ENST00000554040 NBEAQ8NFP9 2946 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 A0A1W2PP55 124 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 MSH4O15457 936 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 CHMP2AO43633 222 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 SRGAP2CP0DJJ0 459 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 CEBPBP17676 345 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 PSMC3P17980 439 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 AXLP30530 894 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 GDI1P31150 447 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 HOXC13P31276 330 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 MCM5P33992 734 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 GRIA4P48058 902 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 LRRC32Q14392 662 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 PSMD5Q16401 504 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 SOWAHCQ53LP3 525 aaPredicted RBP7.61□□□□□ -1.19
ATXN3-224ENST00000554040 FAM78AQ5JUQ0 283 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 EXOSC6Q5RKV6 272 aaKnown RBP7.61□□□□□ -1.19
ATXN3-224ENST00000554040 FAM171A1Q5VUB5 890 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 C1orf228Q6PIY5 440 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 KBTBD6Q86V97 674 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 CEP57Q86XR8 500 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 CCNJLQ8IV13 435 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 RDM1Q8NG50 284 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 EXOC6Q8TAG9 804 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 GAB3Q8WWW8 586 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 CCDC51Q96ER9 411 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 RIT2Q99578 217 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 UNC45AQ9H3U1 944 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 SMOC1Q9H4F8 434 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 CYP4F12Q9HCS2 524 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 VPS45Q9NRW7 570 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 RBM12Q9NTZ6 932 aaKnown RBP7.61□□□□□ -1.19
ATXN3-224ENST00000554040 RBM28Q9NW13 759 aaKnown RBP7.61□□□□□ -1.19
ATXN3-224ENST00000554040 C2orf42Q9NWW7 574 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 FREM2Q5SZK8 3169 aa7.61□□□□□ -1.19
ATXN3-224ENST00000554040 PCNX2A6NKB5 2137 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 ACACAQ13085 2346 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms