RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 FMO5P49326 533 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 EPHA5P54756 1037 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 NOP14P78316 857 aaKnown RBP9.97□□□□□ -0.81
CHD8-206ENST00000553870 TWF1Q12792 350 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 KCNH2Q12809 1159 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 KLHL40Q2TBA0 621 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 CYP4A22Q5TCH4 519 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 VSTM1Q6UX27 236 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 SPATA2LQ8IUW3 424 aaPredicted RBP9.97□□□□□ -0.81
CHD8-206ENST00000553870 ENOX1Q8TC92 643 aaKnown RBP9.97□□□□□ -0.81
CHD8-206ENST00000553870 NXPE3Q969Y0 559 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 RPGRIP1Q96KN7 1286 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 MED15Q96RN5 788 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 SYT15Q9BQS2 421 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 NIF3L1Q9GZT8 377 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 MMRN2Q9H8L6 949 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 DNMT3BQ9UBC3 853 aaKnown RBP9.97□□□□□ -0.81
CHD8-206ENST00000553870 GTF3C4Q9UKN8 822 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 POLIQ9UNA4 740 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 YIPF1Q9Y548 306 aa9.97□□□□□ -0.81
CHD8-206ENST00000553870 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.97□□□□□ -0.81
CHD8-206ENST00000553870 XIRP2A4UGR9 3374 aa9.96□□□□□ -0.81
CHD8-206ENST00000553870 SOBPA7XYQ1 873 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 CLSTN1O94985 981 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 AFPP02771 609 aaKnown RBP9.96□□□□□ -0.82
CHD8-206ENST00000553870 RHOP08100 348 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 PDGFRBP09619 1106 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 ACAT1P24752 427 aaKnown RBP9.96□□□□□ -0.82
CHD8-206ENST00000553870 ASPAP45381 313 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 CDH8P55286 799 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 YWHAEP62258 255 aaKnown RBP9.96□□□□□ -0.82
CHD8-206ENST00000553870 INCA1Q0VD86 236 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 VEPH1Q14D04 833 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 STX1AQ16623 288 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 MGAT5BQ3V5L5 792 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 CBWD6Q4V339 395 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 PABPC1LQ4VXU2 614 aaKnown RBP9.96□□□□□ -0.82
CHD8-206ENST00000553870 CBWD3Q5JTY5 395 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 CBWD5Q5RIA9 395 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 PDZD4Q76G19 769 aaPredicted RBP9.96□□□□□ -0.82
CHD8-206ENST00000553870 GRASPQ7Z6J2 395 aaPredicted RBP9.96□□□□□ -0.82
CHD8-206ENST00000553870 DNAJB7Q7Z6W7 309 aaPredicted RBP9.96□□□□□ -0.82
CHD8-206ENST00000553870 IRF2BP1Q8IU81 584 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 TDRD5Q8NAT2 981 aaKnown RBP9.96□□□□□ -0.82
CHD8-206ENST00000553870 EHBP1Q8NDI1 1231 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 SEMA4DQ92854 862 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 PSMG2Q969U7 264 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 CNOT6LQ96LI5 555 aaKnown RBP9.96□□□□□ -0.82
CHD8-206ENST00000553870 FAM81BQ96LP2 452 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 PI4K2AQ9BTU6 479 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 GPR88Q9GZN0 384 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 NAT10Q9H0A0 1025 aaKnown RBP9.96□□□□□ -0.82
CHD8-206ENST00000553870 APOBEC3GQ9HC16 384 aaKnown RBP9.96□□□□□ -0.82
CHD8-206ENST00000553870 CRTAC1Q9NQ79 661 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 ASAH2Q9NR71 780 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 ABI2Q9NYB9 513 aaPredicted RBP9.96□□□□□ -0.82
CHD8-206ENST00000553870 GDE1Q9NZC3 331 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 EHD2Q9NZN4 543 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 CEP72Q9P209 647 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 EPS15L1Q9UBC2 864 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 ZMYM5Q9UJ78 669 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 SLC27A5Q9Y2P5 690 aa9.96□□□□□ -0.82
CHD8-206ENST00000553870 TCF20Q9UGU0 1960 aaKnown RBP9.95□□□□□ -0.82
CHD8-206ENST00000553870 GTPBP10A4D1E9 387 aaKnown RBP9.95□□□□□ -0.82
CHD8-206ENST00000553870 C2CD4DB7Z1M9 353 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 DLL1O00548 723 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 ATP2C2O75185 946 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 CILPO75339 1184 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 CSH1P0DML2 217 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 CSH2P0DML3 217 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 LAMP2P13473 410 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 ALADP13716 330 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 TBXAS1P24557 533 aaPredicted RBP9.95□□□□□ -0.82
CHD8-206ENST00000553870 EEF1GP26641 437 aaKnown RBP9.95□□□□□ -0.82
CHD8-206ENST00000553870 TAF12Q16514 161 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 SPOPLQ6IQ16 392 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 B3GALNT2Q8NCR0 500 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 JAKMIP2Q96AA8 810 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 PCED1BQ96HM7 432 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 SPATA17Q96L03 361 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 C8orf48Q96LL4 319 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 NT5C1BQ96P26 610 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 SEPT5Q99719 369 aaPredicted RBP9.95□□□□□ -0.82
CHD8-206ENST00000553870 NT5C1AQ9BXI3 368 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 ELOVL4Q9GZR5 314 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 SDCBP2Q9H190 292 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 CRISPLD1Q9H336 500 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 SMYD3Q9H7B4 428 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 TMLHEQ9NVH6 421 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 TMEM63CQ9P1W3 806 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 IGSF9Q9P2J2 1179 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 UXTQ9UBK9 157 aaPredicted RBP9.95□□□□□ -0.82
CHD8-206ENST00000553870 CDH22Q9UJ99 828 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 CDH7Q9ULB5 785 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 KIAA1257Q9ULG3 409 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 MRPS23Q9Y3D9 190 aaKnown RBP9.95□□□□□ -0.82
CHD8-206ENST00000553870 ATP8B3O60423 1300 aa9.95□□□□□ -0.82
CHD8-206ENST00000553870 UNC80Q8N2C7 3258 aa9.94□□□□□ -0.82
CHD8-206ENST00000553870 NCOR1O75376 2440 aa9.94□□□□□ -0.82
CHD8-206ENST00000553870 TSC2P49815 1807 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms