RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 GPR149Q86SP6 731 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 EFCAB13Q8IY85 973 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 DCP1BQ8IZD4 617 aaKnown RBP8.96□□□□□ -0.98
PSEN1-209ENST00000553855 GJD3Q8N144 294 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 C12orf76Q8N812 135 aaPredicted RBP8.96□□□□□ -0.98
PSEN1-209ENST00000553855 C1orf127Q8N9H9 656 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 ZNF461Q8TAF7 563 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 SMG7Q92540 1137 aaKnown RBP8.96□□□□□ -0.98
PSEN1-209ENST00000553855 COL26A1Q96A83 441 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 HPDLQ96IR7 371 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 RPGRIP1Q96KN7 1286 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 IMPG2Q9BZV3 1241 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 DNAI2Q9GZS0 605 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 KCTD10Q9H3F6 313 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 FBXL5Q9UKA1 691 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 FBXW11Q9UKB1 542 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 TIMM13Q9Y5L4 95 aaPredicted RBP8.96□□□□□ -0.98
PSEN1-209ENST00000553855 DNMT3AQ9Y6K1 912 aaPredicted RBP8.96□□□□□ -0.98
PSEN1-209ENST00000553855 BICDL2A1A5D9 508 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 MAPK13O15264 365 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 OAZ2O95190 189 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 FGFR1OPO95684 399 aaKnown RBP8.95□□□□□ -0.98
PSEN1-209ENST00000553855 ZNF16P17020 682 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-209ENST00000553855 PCSK1P29120 753 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 ATICP31939 592 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 LHX1P48742 406 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 AARSP49588 968 aaKnown RBP eCLIP8.95□□□□□ -0.98
PSEN1-209ENST00000553855 FKBP3Q00688 224 aaKnown RBP8.95□□□□□ -0.98
PSEN1-209ENST00000553855 ROR1Q01973 937 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 LRRC63Q05C16 580 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 SMARCB1Q12824 385 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 TAF12Q16514 161 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 NFIL3Q16649 462 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 EDRF1Q3B7T1 1238 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 IQCEQ6IPM2 695 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 LILRA6Q6PI73 481 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 DPH6Q7L8W6 267 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 OTOP3Q7RTS5 596 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 TRAPPC11Q7Z392 1133 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 FAM186BQ8IYM0 893 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 TMEM86AQ8N2M4 240 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 TRIML1Q8N9V2 468 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 TDRD5Q8NAT2 981 aaKnown RBP8.95□□□□□ -0.98
PSEN1-209ENST00000553855 ZSWIM2Q8NEG5 633 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 SLC7A14Q8TBB6 771 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 SPATA18Q8TC71 538 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 SYAP1Q96A49 352 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-209ENST00000553855 DHTKD1Q96HY7 919 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-209ENST00000553855 MFSD14AQ96MC6 490 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 MMS19Q96T76 1030 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 S1PR5Q9H228 398 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 CYP4F11Q9HBI6 524 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 AFF4Q9UHB7 1163 aaKnown RBP8.95□□□□□ -0.98
PSEN1-209ENST00000553855 SNX9Q9Y5X1 595 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 CDH23Q9H251 3354 aa8.95□□□□□ -0.98
PSEN1-209ENST00000553855 CITO14578 2027 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 TRANK1O15050 2925 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 PPEF2O14830 753 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 CYP11A1P05108 521 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 WEE2P0C1S8 567 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 ALADP13716 330 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 ATF2P15336 505 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 HOXA9P31269 272 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 GBP2P32456 591 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-209ENST00000553855 PRCPP42785 496 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 ALDH1A3P47895 512 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 VAMP7P51809 220 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 ZP2Q05996 745 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 ADCY1Q08828 1119 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 MRPL58Q14197 206 aaKnown RBP8.94□□□□□ -0.98
PSEN1-209ENST00000553855 CAMK4Q16566 473 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 COBLL1Q53SF7 1204 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 PLA2G2CQ5R387 149 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 ISM2Q6H9L7 571 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 KLHL10Q6JEL2 608 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 CAPN12Q6ZSI9 719 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 SMYD4Q8IYR2 804 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-209ENST00000553855 TOP6BLQ8N6T0 577 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 OR5B17Q8NGF7 314 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 C2orf15Q8WU43 125 aaKnown RBP8.94□□□□□ -0.98
PSEN1-209ENST00000553855 TMEM174Q8WUU8 243 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 SUSD6Q92537 303 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 ERCC4Q92889 916 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-209ENST00000553855 ZNF512Q96ME7 567 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-209ENST00000553855 RHOBTB2Q9BYZ6 727 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 SNX25Q9H3E2 840 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 DMAC2Q9NW81 257 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 DACH1Q9UI36 760 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 MAN1B1Q9UKM7 699 aa8.94□□□□□ -0.98
PSEN1-209ENST00000553855 WDR27A2RRH5 827 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 BIN1O00499 593 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 ZNF197O14709 1029 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 IKBKBO14920 756 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 SLC16A3O15427 465 aaKnown RBP8.93□□□□□ -0.98
PSEN1-209ENST00000553855 CCL16O15467 120 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 RFPL2O75678 378 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 ABLIM3O94929 683 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 IGFBP6P24592 240 aaPredicted RBP8.93□□□□□ -0.98
PSEN1-209ENST00000553855 CCNE1P24864 410 aa8.93□□□□□ -0.98
PSEN1-209ENST00000553855 PIK3CAP42336 1068 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms