RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 WDR44Q5JSH3 913 aa12.45□□□□□ -0.42
PSMC6-204ENST00000553798 LCE2DQ5TA82 110 aaPredicted RBP12.45□□□□□ -0.42
PSMC6-204ENST00000553798 UNC93AQ86WB7 457 aa12.45□□□□□ -0.42
PSMC6-204ENST00000553798 ADHFE1Q8IWW8 467 aa12.45□□□□□ -0.42
PSMC6-204ENST00000553798 CRYBG2Q8N1P7 616 aa12.45□□□□□ -0.42
PSMC6-204ENST00000553798 TTC39CQ8N584 583 aa12.45□□□□□ -0.42
PSMC6-204ENST00000553798 OR6B3Q8NGW1 331 aa12.45□□□□□ -0.42
PSMC6-204ENST00000553798 FUBP3Q96I24 572 aaKnown RBP eCLIP12.45□□□□□ -0.42
PSMC6-204ENST00000553798 PGLYRP2Q96PD5 576 aa12.45□□□□□ -0.42
PSMC6-204ENST00000553798 SYT15Q9BQS2 421 aa12.45□□□□□ -0.42
PSMC6-204ENST00000553798 FUCA2Q9BTY2 467 aa12.45□□□□□ -0.42
PSMC6-204ENST00000553798 PHF7Q9BWX1 381 aaPredicted RBP12.45□□□□□ -0.42
PSMC6-204ENST00000553798 POMKQ9H5K3 350 aa12.45□□□□□ -0.42
PSMC6-204ENST00000553798 WDR6Q9NNW5 1121 aaKnown RBP12.45□□□□□ -0.42
PSMC6-204ENST00000553798 SAMSN1Q9NSI8 373 aaKnown RBP12.45□□□□□ -0.42
PSMC6-204ENST00000553798 CDH22Q9UJ99 828 aa12.45□□□□□ -0.42
PSMC6-204ENST00000553798 GTF3C4Q9UKN8 822 aa12.45□□□□□ -0.42
PSMC6-204ENST00000553798 NFE2L3Q9Y4A8 694 aa12.45□□□□□ -0.42
PSMC6-204ENST00000553798 C2orf16Q68DN1 1984 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 A8MXQ7 604 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 ATP2C2O75185 946 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 PDGFRBP09619 1106 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 WEE2P0C1S8 567 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 HAPLN1P10915 354 aaPredicted RBP12.44□□□□□ -0.42
PSMC6-204ENST00000553798 PRKCSHP14314 528 aaPredicted RBP12.44□□□□□ -0.42
PSMC6-204ENST00000553798 PTPN1P18031 435 aaKnown RBP12.44□□□□□ -0.42
PSMC6-204ENST00000553798 MAGEA11P43364 429 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 ZP2Q05996 745 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 CDKAL1Q5VV42 579 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 TTC9BQ8N6N2 239 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 EHBP1Q8NDI1 1231 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 MYCBPAPQ8TBZ2 947 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 TATDN2Q93075 761 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 BPIFA3Q9BQP9 254 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 DNAJC25Q9H1X3 360 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 CRTAC1Q9NQ79 661 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 AVENQ9NQS1 362 aaPredicted RBP12.44□□□□□ -0.42
PSMC6-204ENST00000553798 CEP72Q9P209 647 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 USTQ9Y2C2 406 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 YIPF1Q9Y548 306 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 PCDHB5Q9Y5E4 795 aa12.44□□□□□ -0.42
PSMC6-204ENST00000553798 BDP1A6H8Y1 2624 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 TCF20Q9UGU0 1960 aaKnown RBP12.43□□□□□ -0.42
PSMC6-204ENST00000553798 GTPBP10A4D1E9 387 aaKnown RBP12.43□□□□□ -0.42
PSMC6-204ENST00000553798 CCL16O15467 120 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 CILPO75339 1184 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 LRG1P02750 347 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 EEF1GP26641 437 aaKnown RBP12.43□□□□□ -0.42
PSMC6-204ENST00000553798 TIE1P35590 1138 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 MTIF2P46199 727 aaKnown RBP12.43□□□□□ -0.42
PSMC6-204ENST00000553798 RAP1GAPP47736 663 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 ALDH1A3P47895 512 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 NDST1P52848 882 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 EPHA5P54756 1037 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 MYL5Q02045 173 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 TWF1Q12792 350 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 PLD1Q13393 1074 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 NCAPHQ15003 741 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 MAN2A1Q16706 1144 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 TCP11X2Q5H9J9 407 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 MIIPQ5JXC2 388 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 SCARA5Q6ZMJ2 495 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 C4orf50Q6ZRC1 276 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 B3GALNT2Q8NCR0 500 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 ADAMTS19Q8TE59 1207 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 WHAMMQ8TF30 809 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 PCED1BQ96HM7 432 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 TNIP3Q96KP6 325 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 TUBGCP2Q9BSJ2 902 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 NAT10Q9H0A0 1025 aaKnown RBP12.43□□□□□ -0.42
PSMC6-204ENST00000553798 DPEP3Q9H4B8 488 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 PIDD1Q9HB75 910 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.43□□□□□ -0.421e-8■■■■■ 43.5
PSMC6-204ENST00000553798 DNMT3BQ9UBC3 853 aaKnown RBP12.43□□□□□ -0.42
PSMC6-204ENST00000553798 MAGEC2Q9UBF1 373 aaPredicted RBP12.43□□□□□ -0.42
PSMC6-204ENST00000553798 SLC27A5Q9Y2P5 690 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 ASB3Q9Y575 518 aa12.43□□□□□ -0.42
PSMC6-204ENST00000553798 DENND4AQ7Z401 1863 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 CLUHO75153 1309 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 DOCK6Q96HP0 2047 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 C5orf42Q9H799 3197 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 KCNJ18B7U540 433 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 LOC730098B7Z3J9 87 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 MAP3K13O43283 966 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 ZNF18P17022 549 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 PTPN2P17706 415 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 TBXAS1P24557 533 aaPredicted RBP12.42□□□□□ -0.42
PSMC6-204ENST00000553798 EPHB3P54753 998 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 PSMC1P62191 440 aaKnown RBP12.42□□□□□ -0.42
PSMC6-204ENST00000553798 CUL2Q13617 745 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 KCNJ12Q14500 433 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 NFKBIBQ15653 356 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 CCDC142Q17RM4 750 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 ANO6Q4KMQ2 910 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 SMYD5Q6GMV2 418 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 VSTM1Q6UX27 236 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 GRASPQ7Z6J2 395 aaPredicted RBP12.42□□□□□ -0.42
PSMC6-204ENST00000553798 SPATA2LQ8IUW3 424 aaPredicted RBP12.42□□□□□ -0.42
PSMC6-204ENST00000553798 LEMD2Q8NC56 503 aa12.42□□□□□ -0.42
PSMC6-204ENST00000553798 PSMG2Q969U7 264 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms