RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 TXLNGYQ9BZA5 131 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 FOXQ1Q9C009 403 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 DDX47Q9H0S4 455 aaKnown RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 STMN4Q9H169 189 aaPredicted RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 DEFB129Q9H1M3 183 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 ACTR5Q9H9F9 607 aaPredicted RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 AGPAT3Q9NRZ7 376 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 FAM105AQ9NUU6 356 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 SUCOQ9UBS9 1254 aaKnown RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 APEX2Q9UBZ4 518 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 AMACRQ9UHK6 382 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 PFDN2Q9UHV9 154 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 CNOT7Q9UIV1 285 aaKnown RBP6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 PCDHB10Q9UN67 800 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 FRMPD4Q14CM0 1322 aa6.42□□□□□ -1.38
CHMP4A-210ENST00000552620 UBR3Q6ZT12 1888 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 ARHGEF35A5YM69 484 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 CCDC169A6NNP5 214 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 MYO1FO00160 1098 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 TTI1O43156 1089 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 SUSD5O60279 629 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 EXOC3O60645 756 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 GAS7O60861 476 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 PHF2O75151 1096 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 RTN2O75298 545 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 MTA2O94776 668 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 GDF11O95390 407 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 APBA3O96018 575 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 FGGP02679 453 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 VIL1P09327 827 aaKnown RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 NUDT17P0C025 328 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 GZMAP12544 262 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 ITGA4P13612 1032 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 NMT1P30419 496 aaKnown RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 CHRNA3P32297 505 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 FNTAP49354 379 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 STAT2P52630 851 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 GTF2A1P52655 376 aaPredicted RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 ZNF143P52747 638 aaPredicted RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 RBM5P52756 815 aaKnown RBP eCLIP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 GPC5P78333 572 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 MYL7Q01449 175 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 DR1Q01658 176 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 NRG1Q02297 640 aaPredicted RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 CYP4A11Q02928 519 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 ENPEPQ07075 957 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 ACTN3Q08043 901 aaPredicted RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 TCP10Q12799 353 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 BFSP1Q12934 665 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 BYSLQ13895 437 aaKnown RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 CTTNQ14247 550 aaKnown RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 TNIP1Q15025 636 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 TRADDQ15628 312 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 SKIDA1Q1XH10 827 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 USH1GQ495M9 461 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 CEP55Q53EZ4 464 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 KIAA1755Q5JYT7 1200 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 ODR4Q5SWX8 454 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 TTC19Q6DKK2 380 aaPredicted RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 GJB7Q6PEY0 223 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 B3GNT9Q6UX72 402 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 NIPA1Q7RTP0 329 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 TMC3Q7Z5M5 1100 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 DDX42Q86XP3 938 aaKnown RBP eCLIP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 COL23A1Q86Y22 540 aaPredicted RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 CCDC50Q8IVM0 306 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 ANKRD13AQ8IZ07 590 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 SYCP3Q8IZU3 236 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 CNPY4Q8N129 248 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 PRPF38AQ8NAV1 312 aaKnown RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 KLHL6Q8WZ60 621 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 LENG1Q96BZ8 264 aaPredicted RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 TLCD1Q96CP7 247 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 PGM2Q96G03 612 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 ACCSQ96QU6 501 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 UIMC1Q96RL1 719 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 FIZ1Q96SL8 496 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 FMO2Q99518 471 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 TMEM109Q9BVC6 243 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 GPR88Q9GZN0 384 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 WNT8AQ9H1J5 351 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 TAOK3Q9H2K8 898 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 RANBP17Q9H2T7 1088 aaKnown RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 ST6GALNAC4Q9H4F1 302 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 RGL1Q9NZL6 768 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 BCCIPQ9P287 314 aaKnown RBP eCLIP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 MTRF1LQ9UGC7 380 aaKnown RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 PCYOX1Q9UHG3 505 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 SLC12A6Q9UHW9 1150 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 ZMYM5Q9UJ78 669 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 DBR1Q9UK59 544 aaKnown RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 AJAP1Q9UKB5 411 aaPredicted RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 TRPC5Q9UL62 973 aaPredicted RBP6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 TMX2Q9Y320 296 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 ZNF536O15090 1300 aa6.41□□□□□ -1.38
CHMP4A-210ENST00000552620 GOLGA6L7A0A1B0GV03 622 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 C9orf172C9J069 976 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 ANKRD65E5RJM6 399 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 E7EVH7 732 aa6.4□□□□□ -1.38
CHMP4A-210ENST00000552620 H0YHG0 523 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms